KEGG   Scyliorhinus canicula (smaller spotted catshark): 119978499
Entry
119978499         CDS       T11175                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27 isoform X1
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119978499 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:scau03041]
    119978499 (bcas2)
   03400 DNA repair and recombination proteins [BR:scau03400]
    119978499 (bcas2)
Spliceosome [BR:scau03041]
 Complex B
  Other components
   Prp19 complex
    119978499 (bcas2)
 Complex C
   Prp19-CDC5 complex
    119978499 (bcas2)
DNA repair and recombination proteins [BR:scau03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    119978499 (bcas2)
SSDB
Motif
Pfam: BCAS2 THOC7 PIN-TPR-GreABC Mbeg1-like INO80F HisKA CENP-F_leu_zip
Other DBs
NCBI-GeneID: 119978499
NCBI-ProteinID: XP_038676100
LinkDB
Position
15:91367465..91407794
AA seq 225 aa
MAGPLAVAGDVVVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLPTPDYSA
FETEIMRNEFERLAARQPMELLSMKRYELPAPSSGQKNDITAWQESVNNSMAQLEHQAVR
IENLELMSQHGSNAWKVYNDNLVQMIENAQKELQRLRKQIQDLNWLRKNDQLAAGSKLRE
MESNWVTLVSKNYEIERAIVQLESEIHKMKQAQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcccgctggctgtggctggcgatgtggtcgttgatgcgctgccctattttgac
caaggttacgatgctccgggtgtccgagaggcggcagctgctctggtggaggaggagacc
agacgttatcgacccacaaaaaattacctgagctatttgcctacacctgactattcagca
tttgaaaccgaaattatgaggaatgaatttgagcgactggcagctcgccaaccaatggaa
ctgctcagtatgaaaaggtatgaactgcctgccccatcttcaggacagaagaatgatatc
acagcatggcaggaatctgtgaacaactccatggcacagctagaacatcaagcagtgaga
attgaaaacctggagctgatgtcacagcatggttcaaatgcatggaaagtctataatgac
aatctggtacagatgattgaaaatgctcagaaggaactccaaagactgaggaaacagatt
caagacctgaactggctgaggaaaaatgaccagctcgctgctggcagtaagctacgagaa
atggaatccaactgggtcacgttagtcagcaagaactatgagattgagagagcaattgtc
cagctcgaaagtgaaatacacaagatgaaacaagcacaaggggatgagaacaaagaaaac
attcggcaggacttctga

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