Scyliorhinus canicula (smaller spotted catshark): 119978683
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Entry
119978683 CDS
T11175
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119978683 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119978683 (gspt1)
03012 Translation factors [BR:
scau03012
]
119978683 (gspt1)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119978683 (gspt1)
Translation factors [BR:
scau03012
]
Eukaryotic type
Release factors
119978683 (gspt1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119978683
NCBI-ProteinID:
XP_038676403
LinkDB
All DBs
Position
15:complement(5103597..5178000)
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AA seq
570 aa
AA seq
DB search
MDAKDVADYAPDSWELAADTEAEAQVNNSFSKLNVNAKPFVPNVHAAEFVPSSLRSSDEA
PEGPDATDANMEVSEPAAPVENGDTEAGSEESWEQKAEPSEAEPGGGPAGDGGPPLAAPV
GMEEEEDVSTPKVAVVEPGAPRKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKY
EREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETQKKHFTILDAPGHKSFVPNM
IGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVSW
SQDRYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKERADNCSWYTGLPFIPYLD
NLPHFYRTINGPVRVPIVDKYKDMGTVVLGKLESGLIGKGHQLVMMPNKHNVEVLGLLSD
DVETETADPGENLKIRLKGIEEEEILPGFILCDHGSLCHSGRTFDAQIVIIEHKSIICPG
YNAVLHIHTCIEEVQIAALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFK
DFPQMGRFTLRDEGKTIAIGKVLKLIPEKD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaaagacgtggcggattacgccccggattcctgggagctggcggccgacacg
gaggccgaggcccaggtgaacaactccttctccaagctcaacgtgaacgccaagcccttc
gtccccaatgtccacgcagccgaattcgtcccctcctccctcaggagctcggacgaggcg
cccgaagggccggatgctacagatgccaacatggaagtctctgagccagctgccccggta
gaaaatggcgatacagaagcaggatcggaggaatcatgggaacagaaagcagagccgagt
gaagcagaaccaggaggtggtcctgctggcgatgggggtccaccgttggcagctccagta
ggaatggaagaggaggaggatgtgtctacgccaaaggttgctgtggtagaaccaggtgct
ccaaggaaggaacatgtaaatgttgtattcattggtcatgtagatgctggaaaatccact
attggtgggcaaataatgtacctcacaggtatggttgacaaacgaacattggagaagtac
gagagggaggccaaggaaaaaaatagagaaacatggtacctttcctgggccttggacacg
aaccaggaggagcgagataagggcaaaacagtagaagtgggccgtgcatattttgagaca
cagaagaagcacttcaccattttagatgctccaggtcacaaaagctttgtaccgaatatg
attggtggggcatctcaagctgaccttgctgtcttggttatatcagccagaaaaggtgaa
ttcgaaactggctttgagaaaggaggtcagacacgagaacatgctatgttggcaaaaaca
gcaggagtgaaacatctgatagttctcattaacaaaatggatgacccaacagtaagctgg
agccaagataggtatgaagaatgcaaagaaaaacttgtgccatttttgaagaaagttggt
ttcaatccgaagaaggatattcactttatgccttgctctggactaactggcgcaaaccta
aaagaacgagctgacaactgctcttggtacactgggttaccatttattccctatctggac
aatttgccacatttctataggacaatcaatgggcctgtacgagtaccaattgtagataaa
tataaggatatgggtactgtggttctaggcaaactagaatctggattaattggaaaagga
caccaacttgtcatgatgccaaacaaacacaacgttgaagttctgggtctcctgtctgat
gacgtagagactgagactgcagatccaggtgaaaatctaaagatacgactgaaaggaatt
gaagaggaggagatactgccaggattcatcctgtgtgaccatggcagcctttgtcactcg
ggacgtacttttgatgctcagatagtcataattgagcataaatccatcatctgcccaggc
tacaatgcagtgctgcacattcatacttgcattgaagaagtgcagatcgcggccttaatc
tgtctggtggataagaagtctggagagaagagcaagacgcggccccgttttgtcaagcag
gatcaggtttgcattgctcgtttaaggacagcaggaactatctgcctcgagaccttcaaa
gattttcctcaaatggggcgttttaccttgagggacgaaggtaaaactattgcaattggg
aaggtcctgaagctgatcccagagaaggactga
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