Scyliorhinus canicula (smaller spotted catshark): 119978749
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Entry
119978749 CDS
T11175
Symbol
tom1l2b
Name
(RefSeq) TOM1-like protein 2 isoform X1
KO
K26401
target of Myb membrane trafficking protein 1 and related proteins
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119978749 (tom1l2b)
Membrane trafficking [BR:
scau04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
119978749 (tom1l2b)
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
119978749 (tom1l2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
GAT
DUF3689
Motif
Other DBs
NCBI-GeneID:
119978749
NCBI-ProteinID:
XP_038676517
LinkDB
All DBs
Position
15:45977557..46108545
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AA seq
550 aa
AA seq
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MEFFIGNPYSTPVGQCVGQHFPNRSSVGLIQEFHERATDGSLQTEDWTLNMEICDIINET
EEGPKDAIRALKKRLSGNKNYREVMLALTILETCVKNCGHRFHVLVANRDFVDGVLVKIV
LPKNNPPAIVQDKVLGLIQAWADAFRSSPDLTGVVHIYEELKRKGMEFPMADLDALSPIH
TPGRCIPEVDPAMNKPMPPSLQKNTNSLPSAPSALTAYSVPQGLPTGPITANVEQLARLR
SELDVVRGNAKVMSEMLTETVPGQENQSDFELLQELNRTCRAMQQRVVELLSNVTNEEIT
EELLHVNDDLNNVFLRYERFERCRSGRGNQDAEDGVLNEVTDTDNLIDLGPGSPAVVSPM
VGNMTAPSLSSQLAGLDLGADNVSGTLSSLTNCNPDARDSANFDMFAQTRSNSLADQRKN
VTYEDLQSVGGLATAIDVRQNNAAVMQLNIRTDNPDIEPIDKWLMTQGMIPVAKSIMDDV
EEWLSTDVRGDDAEEGVTSEEFDKFLEERAKAAERVPNLPSPPCSNSTSLAVPAESIKKP
DRSKDTLFAL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggagttcttcattgggaatccgtacagtactcctgtagggcaatgtgtaggacagcat
ttcccaaaccggagttctgtgggactcatccaggaattccacgaacgagccacagatgga
tccctacagactgaagactggactctgaatatggaaatctgtgatattattaatgagact
gaagaagggccaaaggatgcaataagggctctcaaaaaaaggctgagtggaaacaaaaac
tatcgggaagtgatgcttgctttaacgattttggagacatgtgttaagaactgcggtcat
cgtttccatgtcctcgtggccaaccgtgactttgttgatggtgtattggtaaaaattgtc
ttgcccaagaataatccacctgctattgtgcaggataaagtccttggattgatacaggct
tgggctgatgctttcaggagtagtccagatctgactggagtagttcatatttatgaagag
ttgaagagaaaaggaatggagttcccaatggctgatctggatgcactgtctccgatacac
acaccagggagatgtattcctgaggtggatcctgcaatgaacaaaccaatgcctccgtcc
ctacagaaaaacacaaacagcttaccatctgcaccatctgcactaactgcttattcagtc
cctcaaggcctcccaactggaccaatcactgcaaatgttgaacagcttgccaggttgcgc
agcgagctggatgttgtccgtggaaatgcaaaagtgatgtcagagatgttaaccgaaaca
gtccctgggcaggaaaatcaatctgactttgagctgttacaggaactaaaccgtacatgt
cgagcaatgcagcaacgagttgttgaacttctctccaatgtaaccaacgaagagatcaca
gaggaacttctacatgtaaatgatgatcttaataatgtctttcttcggtatgagagattt
gaacgatgtagatcaggacgtggaaatcaggatgcagaagatggagtattgaatgaagtt
acagacacggataatctgatagacttgggcccaggttcccctgcagttgtgagcccaatg
gttggaaacatgactgctccttctctgtcctcacagctcgctgggctagacctgggcgca
gataatgtcagtggtaccctcagctcattgaccaactgcaatccagatgctcgagattca
gctaactttgatatgtttgcacagaccagaagtaattctctggctgatcagcgcaaaaat
gtaacatatgaggacttgcagtcagttggaggattggcaactgccattgatgttcgacaa
aataatgcagcagtgatgcagctgaacattagaactgacaatccagacatcgagcctata
gacaagtggctcatgacacaaggaatgattcctgtcgcaaagtctatcatggacgatgtt
gaagaatggctcagcactgatgtgagaggagatgatgcagaagaaggagtaacaagtgaa
gaatttgataaatttttggaagaaagagcaaaagcagcagagagagtcccaaacctgcct
tcccctccctgcagtaactccacttctctggcagtgcctgctgaaagcataaagaaaccg
gatcgttccaaggatactctatttgctttataa
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