Scyliorhinus canicula (smaller spotted catshark): 119978784
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Entry
119978784 CDS
T11175
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119978784
03037 Cilium and associated proteins [BR:
scau03037
]
119978784
Transporters [BR:
scau02000
]
Other transporters
Pores ion channels [TC:
1
]
119978784
Cilium and associated proteins [BR:
scau03037
]
Other cilia and associated proteins
Stereociliary proteins
119978784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
HTH_48
Motif
Other DBs
NCBI-GeneID:
119978784
NCBI-ProteinID:
XP_038676589
LinkDB
All DBs
Position
15:complement(1134986..1387655)
Genome browser
AA seq
970 aa
AA seq
DB search
MQGKEKASIMSQGKERTSIEIITIGDNYANQEANHLRFSEEVIIEPDDSPEEKLTLWQRL
QQLYQLATALLLFFYHYFTESQPEHEKTVTPPTQEKELDKISQVPSENAAPVTLQDLVKP
KATKVVINIDEIASATLKKINDARWKAEAKRRRTIGVTLRLASLAGLSLSQYSMPETELS
EEEKEDKIQLIAELAKLSLNERTKVIQQLTMSIEEKRDIRDQVQQKIGPRTAEKDVKIHR
CTQLLYEAFYSLRRFREIMLMCFQSIHPWTGSLKVIGSKFGTGVLSYFTFLKWLLMFNLF
SFLINFSFIAIPQFFDMGINNLTFTGLELLTGSGYFTKTIFYYGFYSNHSIQASPTAEQY
NMQLAYFLTIGVYMLSCFLYLVFSMGKSFNESVVEVGILSGDAAKLLCSWDYNITNEKAV
ELKRRNLSTQLKEMLSDKMRYHRQLSTKQRILRYFIHFMSWIISLGTTYGCCLGIHSYSI
VNFQNIWYYIYTSGRLICVEFLGKRANFRNWMNWLIDKLNSGEEFDPVKAQAVEFSLRSE
LSVADRPAKRNEPSKLWSIIYKDPIEEEMQKQAATLVLPIVVAIINLFIPLFFSFLGVME
RFKYARHEIYILIIRNVLLKMSIIGVLCYYWLVTVASTVECWETFVGQDLYRLVVIDFIF
SLLGSFFGEFIRSIMGTHCCRQLGVPEFDIARNVLGLIYAQTLAWIGLFFAPLLPAIQII
KFFIIFHVKKVSLMMNCQPPRQAWRASHMTTIFIFLLFFPGFLGVLCLLGVTVWKWKPSK
HCGPFRGLSVPYNSISHFIHIIQGRFAQMFWLVWAYKNLIKNPLFYFLLTIIVFAIIYLY
FQIIDGQKMMTKLLQEHISNEGKDKTYLLRKLNTVKLKIGSSKETVQPLKITEETGDEID
TESKLNLHFETSRVINYQTPRIDEHTLAEDQDRISEQDIEEPAYQSTREESGSALALAMA
ARHQAEDPNE
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaaagagaaggcgagtatcatgagccaaggtaaagagagaacatcaatagaa
ataataactattggtgacaattacgcaaaccaggaagcaaatcatctcaggttttcagag
gaagtcatcattgagccagatgattctccagaggaaaaattaactctttggcagcgtttg
cagcagctctatcagcttgccactgctctgctcctgtttttctaccactattttacggaa
tcacagcccgagcacgagaagactgtaacacctccgactcaagaaaaggaattggataaa
ataagtcaagttccatcagaaaacgccgcaccggttactttacaagatttagttaaacca
aaagccacaaaagtagtgataaatattgatgagattgcttcagcaacactgaagaagatt
aatgatgcacggtggaaagctgaagctaaaagacgaaggacaattggtgttactttgcga
ttggcgtccttggctgggctatctctatcacagtatagcatgccagaaactgaactaagt
gaagaagaaaaagaagataaaattcaacttattgctgagctggccaaattatcgctcaat
gagaggacaaaggtaattcagcagctgacaatgagcattgaggagaaacgagatatcagg
gatcaggttcagcagaagattggacctcggacagctgagaaagatgttaaaattcacaga
tgtacccagctgctgtatgaagcattctattctcttcggcgtttccgtgagattatgctg
atgtgtttccagtcaattcatccctggaccggatctctaaaagtcattgggagcaagttc
ggaacaggagtcctttcctatttcaccttcctcaaatggctgcttatgttcaacttgttc
tccttcctgataaacttcagcttcatcgccatcccacaattcttcgatatgggtattaac
aatctgaccttcactggcttggagctgctcactggctcaggttattttacaaaaactatt
ttttactacgggttttattcaaatcacagtattcaagcaagtccgacagccgaacagtat
aacatgcagcttgcttacttcctgaccatcggagtttacatgttgagttgctttctgtat
ctggttttcagcatgggaaagtcattcaatgaaagcgttgttgaggttggcattctgtcc
ggagatgctgccaaactcttgtgttcgtgggattacaacatcacaaatgagaaagcggta
gaactgaaaagaagaaatctgagtacacagttaaaggaaatgttatcagataaaatgcgc
taccaccggcaactgtcaacgaagcagagaatcttgcgatactttattcattttatgagc
tggattatttcattaggaacaacgtatggttgctgtttgggaattcattcctattctatc
gtcaatttccagaatatctggtattacatatacacaagtggtaggttgatctgtgtagag
tttctaggaaaacgagcaaactttcgaaattggatgaattggttgattgataaactgaat
tctggggaagaatttgatccagtcaaggcacaggcagttgagttttcattacgttccgag
ctgtcagtggcagatagaccagcaaagcggaatgagccatctaaattgtggtctattatt
tataaagatcctattgaagaggaaatgcaaaaacaagcagcgacgttggtattacctatt
gtggtggccatcatcaatctgttcattcctttattcttctcattccttggcgttatggaa
agattcaaatatgcacggcatgagatatatattctcattatcaggaatgttttgctgaaa
atgtcaataattggagttctgtgttactattggctagtgacagtagcaagcactgtagag
tgttgggaaacatttgtgggccaggatctgtatcgacttgtggtgattgattttatcttc
tccttattgggttccttcttcggggagttcattcgaagtatcatgggaacgcactgctgc
cgtcaactcggagttccagaatttgacattgcacggaatgtattgggtttaatctacgca
caaactctagcatggattggacttttcttcgcaccccttttaccagcgatacagatcata
aagttcttcattatatttcatgttaagaaggttagcctaatgatgaattgccaaccccct
cgccaagcctggcgagcttcccatatgacaaccatctttattttcctgttgttctttcct
ggcttccttggcgtcctttgcttattgggagtaacggtgtggaaatggaagccttccaaa
cattgtggtccttttcgagggttgagcgtgccctataattccatttctcattttattcac
ataatacaaggaagatttgctcagatgttctggcttgtctgggcctataagaacctgata
aaaaacccactattctacttcctcctaacgattattgtgtttgctatcatctacctgtat
tttcaaattattgatgggcagaaaatgatgacaaaactcttgcaggagcacatcagtaat
gaaggaaaagacaaaacatatttactgcgaaagctcaacacggtgaaattaaagattggg
tcttctaaagagacggttcagccgctcaaaatcactgaagagaccggcgatgagattgac
actgaatcaaagcttaatctgcacttcgagacaagtcgagttatcaactatcaaacacca
agaattgatgaacacactttggccgaagatcaagatagaatcagtgaacaagatatagaa
gaaccagcttatcagagtacacgagaagaatcgggcagtgctcttgcactggctatggct
gccaggcatcaggctgaggacccaaatgaataa
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