Scyliorhinus canicula (smaller spotted catshark): 119979406
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Entry
119979406 CDS
T11175
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scau03400
]
119979406 (ap5b1)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
119979406 (ap5b1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Paramyxo_ncap
Motif
Other DBs
NCBI-GeneID:
119979406
NCBI-ProteinID:
XP_038677510
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All DBs
Position
16:complement(109176050..109188753)
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AA seq
926 aa
AA seq
DB search
MALPNYDWAQKLAAFHADPARFLDSTTTQNFVGDLLRALTDEKTGENVKKQILGVIQEFP
TWLFTNSQAAERAAESIFSIYSQLPFVPKAVNLKCHLLLSVTTIVITTDHLISNEKVLKN
LMRQLLDAVCDTNDRKYGGGFRPLRAVACDCLREFETCYPGLLSRKLDLLHTLQQKEVTP
LHQAYTLLYSQVLKNAIRALSQSRSVSDGAIREMLTRNEEIKWKVMAKAQDLSAVTITSG
LSSLPSTVETKELKSSVTLLLEECFLLTPVSQAALLREVIQVVLLVRSLAPAIFRSQLLR
LFGTMDISLLHTMLHMKATFTDSLFTVEDENFLLKRLVCMAHHPLLSNPLKLFYMDCLLH
FPENRPINSNLEENLPILFTPKMAACLFPTLFNDSSTMLSCLNLVSLMSVENAEEDRGLA
EIFDYLMSLYKLVDVNGSRERTVTFFRAVYIFVGYFHTNEMFMVELTQYMVKLYQRHCTL
APHMINLINSTQNLLEDAKWPVSLAEALQKMIVEFPSKQLSPHKLMWHLRVLTRVAKEAT
ILQKVTVQFLLNVVRASDVCRSGDWRTGNAVLAVCRSILHHQNLEPIFSDLADLLQHIHL
QFQDVDIQDHAHFYYALLTCLSHEKLARIVAEGTGNCSRAKTRSLSSLMSESTGHSISVL
PIKHPVLKLIPVPEEHCPNLSAAGDTSEMDYEEDYLEKYLGQFCIVGFASTIVMKFHLTF
AERVDPEHHRVYAIHLHFDLRNSHYEPLSDLYVPCLFFNGEPHVFSLPFKPRLPFPITLY
TSAIFTREDGSTCCSQLEPLDVGFSRLFLTLPVPKNWPSKIKASLFDQLWTSLAQADSSQ
SALSRFCFQTAQRPLSELVTLHFQKYVVSQKSDPESYKIFLFLPPQTNILFSVEQLDSVA
KVDIVTDNWKLLPFINSYLIDITSQK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcctaattatgattgggcccagaagttagcagcattccatgccgatccggca
cgtttccttgacagtacgacaacacagaactttgtaggcgatctgttgagagccctgacg
gacgagaagactggtgaaaatgtaaagaagcagattctcggggttattcaggagtttcca
acatggttgttcaccaactcccaggctgcagaacgggcagcagagtccatcttcagcatc
tactcacaactgccctttgtacccaaggcagtcaatctgaaatgccacctgctgctttca
gtgaccactatcgtaataaccactgatcacctgatcagcaatgagaaagtattgaaaaat
ttgatgagacaactgcttgatgcagtgtgtgacaccaacgatcgcaaatacggtgggggt
tttaggcctctacgggccgtagcgtgcgactgtcttcgagaatttgaaacatgctacccc
ggactcctgtcacgaaaactggaccttctacataccctccagcaaaaggaggtcactcct
ctgcaccaggcctacacattgctgtacagccaagtgctgaaaaatgcaatacgcgcgctc
tctcagtcgcgcagcgtgtcagatggcgccatccgtgagatgttgacaaggaacgaggag
atcaaatggaaggtaatggccaaagcgcaagatttatcagctgtcaccataacaagcggc
ctttcctcactcccatctaccgtcgaaacaaaggagttgaaatcctccgtgacattgctg
ctggaggaatgcttcctccttactccagtatcccaagctgcattgcttcgtgaagtaatc
caggtggtccttctcgtgcgctcacttgctccggccattttcagatcccagttactgcgt
ctgtttgggacaatggatatatccttgctgcacaccatgctgcacatgaaggcaaccttc
actgacagtcttttcactgttgaggacgagaactttcttttgaagcgtctagtctgcatg
gcccatcacccgctgctcagcaatcctctcaagctcttctacatggactgcctacttcac
ttccctgaaaaccggcccattaactcaaacctggaagagaatcttccaattttgttcacc
ccaaagatggcggcatgccttttccccacactatttaatgacagtagcacaatgctgtct
tgtctcaacctggtgagtctcatgagtgttgagaatgctgaggaggatagaggactcgct
gagatctttgactacctaatgtctttatacaaactggtggatgtgaatggaagccgagaa
cgcactgtgacatttttccgtgcggtgtatatatttgtgggctacttccataccaatgaa
atgtttatggtagagttgacccagtatatggtcaaactgtaccaaaggcattgcacctta
gctccgcacatgatcaacctaattaatagcacccaaaacctcctggaagatgcaaaatgg
cctgtttcattggcagaggctttgcagaagatgatcgtggagttcccatcaaagcagttg
tcccctcataaactgatgtggcacctcagagtgctcacaagagtggccaaagaagctaca
atattgcagaaggtgacagttcagttcttgctgaatgtcgttcgagcttctgacgtgtgc
aggtcgggtgactggcgaacgggtaacgcagtcctggccgtgtgccgaagcattctgcat
caccagaacttggaacccatcttcagtgaccttgcagatctcctgcagcacatccacctc
cagttccaagatgttgacattcaggatcatgctcatttctattatgcactactcacctgt
ctctcccatgagaagctagccagaattgtggcagaggggacagggaactgcagtcgagca
aaaacgcgatcactctcttccctcatgtctgagagcacaggtcactcgatctccgtactt
ccaatcaagcatccggtactaaagctcattcccgttcctgaagaacactgtcccaacctc
tctgctgctggagacaccagcgaaatggactatgaagaagattacctggagaaatacttg
ggtcagttctgtattgttggatttgcttctacaattgtgatgaaattccatttgactttt
gcagagagggttgatcctgagcatcacagggtctacgccatacacttgcattttgacctg
aggaactctcactatgagccactgagtgatctctatgtaccatgcctcttcttcaatggg
gagcctcacgttttctctctgcctttcaagccgcgcctaccatttcccatcactctatac
acaagtgccatctttaccagggaggatggcagcacgtgctgcagtcaactcgagcctctc
gatgttggtttctcccgattgttcctgactcttcctgtcccaaaaaattggccatcgaag
atcaaggccagtctctttgaccagctgtggacatccttggcccaggctgactccagccag
tctgcccttagtcgcttttgctttcagacagcacaaagacctctgagtgaacttgtcacc
ttgcattttcaaaaatatgttgtgtcacaaaaatctgacccagagtcttacaaaatcttt
ctgtttctgccccctcaaaccaacattctgttcagtgtggagcagttggacagtgtggcg
aaggttgacattgtgactgataactggaagcttttgccattcattaattcttacctgatt
gacataacatctcaaaaatag
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