Scyliorhinus canicula (smaller spotted catshark): 119979584
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Entry
119979584 CDS
T11175
Symbol
pcgf5b
Name
(RefSeq) polycomb group RING finger protein 5-B isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119979584 (pcgf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119979584 (pcgf5b)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
119979584 (pcgf5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Actin_micro
zf-RING_10
zf-Nse
zf-RING_5
zf-rbx1
zf-RING_6
TRAF3_RING
DUF8589
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
119979584
NCBI-ProteinID:
XP_038677963
LinkDB
All DBs
Position
16:complement(58108257..58358200)
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AA seq
235 aa
AA seq
DB search
MATQRKYLVREFNAFITCYVCKGYLIKPTTVTECLHTFCKSCIVQHFEDTNDCPKCGIQV
HETNPLEMLRLDNTLEEIIFKLVPGLKEMEKRQEEEFWKKNKPQENGEDNEGPKAKKAKI
EEEEDQEDQDYHRSDPQIAICLDCLRNNGQSGDNTVKGLMKKFIRCSTRVTVGTIKKFLS
LKLKLPSTCELDVLCNGEIMGKDHTMEFIYMTRWRLRAENSYPMVLQYRPRIDFG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggctacacaaaggaaatacctagtgagagaatttaatgccttcatcacttgttacgtc
tgcaagggctatcttatcaagccaactacagtgactgagtgtctgcacactttttgcaaa
agttgtattgttcaacattttgaagacacaaatgactgtccaaaatgtggaattcaagtt
catgaaactaatccattggaaatgttaaggttggacaatacgctagaagaaattatattt
aaactggtgcctggtcttaaagaaatggaaaaacggcaggaagaagaattctggaaaaaa
aataaaccacaagagaatggagaagataatgaaggccccaaagcgaagaaagctaaaatc
gaagaagaagaggaccaagaagatcaggattatcacagaagtgatccacagattgccatt
tgtctagactgtctccgcaacaatgggcaatcaggagataatactgtaaagggcttaatg
aagaaatttatccgctgctcaaccagagtcacggtggggactataaagaaatttctgagt
ttgaaattaaaacttcctagcacttgtgagctcgatgttctatgcaatggggaaattatg
gggaaggatcataccatggaattcatatatatgactagatggagactcagagctgaaaat
tcttatccaatggtactacagtatcggccaaggattgactttggttag
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