Scyliorhinus canicula (smaller spotted catshark): 119979632
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Entry
119979632 CDS
T11175
Symbol
pex5
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisomal biogenesis factor 5
KO
K13342
peroxin-5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119979632 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119979632 (pex5)
Membrane trafficking [BR:
scau04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119979632 (pex5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_17
TPR_14
TPR_16
TPR_12
TPR_19
TPR_CcmH_CycH
ANAPC3
TPR_Slam
TPR_20
TPR_9
TPR_10
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
119979632
NCBI-ProteinID:
XP_038678075
LinkDB
All DBs
Position
16:86254560..86284360
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AA seq
672 aa
AA seq
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MLVPVFEAVDRGGDRVKAGGGEGGAVTMAMRDLVETECGGSNPLMKLTTHFTRDKGLRQE
GIGVSPWPGGAGVSEISLPLGTGKEEELVSEFLTEQNGPLLSRAPHTFKMDDLLAEMQEI
ENSSLRFGPQRAPGVADLAISGSWAEEFLASEPTVDISRGYSEADWSREFIAEAADPEAT
CPAKWAQEYLEQTEEKLWLGEHEIERAQEAKWTEEYRPEDELQQAASEFLEKINDPKLEG
SEFVQFLRRVGEGQLTFEEERPSVCADRGEAQAKRWAAGFAQELEQTPEQKAEAWADEFY
HRSAAISHXNTEYQHAKAAVESDVDFWDKLQAEWEEMAQRDTESHPWLSDFDKVLSTSYD
KGYRFEEENPMRDHPRAYEEGLRRLQEGDLPNAVLLFEAAVQQNGEHMEAWQYLGTTQAE
NEQEHAAISALRRCLELKADNLTALMALAVSFTNESLQKQACNTLRDWLKHNPRFSHLVR
DELDKSQGQKAFGSLLSDTLFGEVKELFLRAVQSTPGEIDADVQCGLGVLFNLSGEFDKA
VDCFNTALSVRPNDYLLWNKLGATLANGSRSEEAVEAYRRALELQPGFIRSRYNLGISCI
NLGAHREAVEHFLEALNMQRKSRGPEGERGQMSDNIWSTLRMALSMLGQTDLYQVADARD
LGTLLRAFNLDH
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcccggtctttgaagccgtggataggggaggggatcgggtgaaggccggagga
ggtgaaggtggagctgtcaccatggcgatgcgtgatctggtggagacggagtgtgggggt
tcgaaccccctgatgaagctgacgacgcatttcacacgtgacaagggactgcgtcaggag
ggcatcggtgtttctccatggccggggggtgcaggggtttccgagatatctctgccgctt
ggaacaggcaaagaagaagagctcgtctcggagttcctaacggaacagaatggccctctc
ctttcccgcgcccctcacaccttcaagatggatgacctcctggctgaaatgcaggaaatc
gagaattccagtctccggtttggccctcagcgagcccctggagtggcggacctggctatt
tctggaagttgggcggaggagttcctggcttccgaacccactgttgacatatcacgaggc
tacagcgaagctgattggtcccgggagttcatcgctgaggcggcggaccctgaagctacc
tgcccagccaagtgggctcaggaatacctggaacagacagaggagaaactgtggctgggc
gagcatgagatcgaacgtgctcaggaagccaaatggacggaggagtaccgcccagaggat
gagctgcagcaggctgccagtgagtttctggagaagatcaacgaccccaagctggaagga
tcagagtttgtccagttcctgcgacgggttggcgagggtcagctgacattcgaggaagaa
cggccgtcagtctgtgctgaccgaggggaggcccaagccaagcgctgggccgctgggttc
gcccaagagttggagcagactccagagcagaaggcagaggcctgggcggatgaattttac
cacaggtcagcggcaatctctcacnccaacacggagtaccagcatgccaaggctgctgtc
gagtcagatgtggatttctgggataaactccaggcggaatgggaggagatggctcagaga
gacacagagtctcacccctggctctcggattttgacaaggtgctatctacatcgtatgac
aagggttacagattcgaggaggaaaaccccatgagggaccaccctcgtgcctacgaggaa
ggtttgcggaggctgcaggagggtgatctcccaaacgcagtgctcctgtttgaggctgcc
gtgcagcagaatggagagcacatggaggcctggcaatacctaggtacgacacaggctgag
aacgaacaggagcatgcagccattagtgctctgcgcagatgtttggagttaaaggcagat
aatttaacggctctgatggcactggctgtgagctttacaaatgagtcacttcagaaacag
gcgtgcaacacccttcgcgattggctgaaacacaaccccaggttctcgcacctggtcagg
gacgagttggataaatcgcagggtcagaaagcatttggatccctgctttcagacacccta
ttcggtgaggtgaaggaactctttctcagagctgtccagagtacccccggggagattgac
gctgatgtacagtgtggtctcggtgtcctcttcaatctgagcggggagtttgacaaggcc
gttgactgtttcaacacagctttgagtgtgcggcccaacgactacttgctctggaacaag
ttaggggccaccttggcgaatggttctcgtagtgaggaggcggtggaagcctatcgccgg
gcgttggaacttcagccgggcttcattcgctctcgctacaacctgggcattagctgtatc
aacctgggagcgcacagagaggcggtggagcacttcctggaggctctcaacatgcaaagg
aagagccggggtcccgagggcgagcggggacagatgtcagacaacatttggagtactctt
cgcatggctctgtccatgctgggtcagacagacctgtaccaggtagcagacgcccgcgac
ctgggcaccctcctccgtgccttcaatttggaccactga
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