Streptomyces cavourensis: CVT27_00145
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Entry
CVT27_00145 CDS
T07023
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
scav
Streptomyces cavourensis
Brite
KEGG Orthology (KO) [BR:
scav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scav03016
]
CVT27_00145
Enzymes [BR:
scav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CVT27_00145
Transfer RNA biogenesis [BR:
scav03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CVT27_00145
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ATY99759
LinkDB
All DBs
Position
28086..28706
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AA seq
206 aa
AA seq
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MNELPDAMTGPAVDGRGQAATIRVFLALAPPDDAKDELERALRPAYAAHPRLRWNRIEDW
HITLAFLGELPLAAVPPLMPPLSGLAARRRPLRLALRGGGHFDERVLWSGIDGDLEGLHR
LATDVRELVRACGVSFPERPLRPHLTLARSRRGDQGGTVEIAAGLAPFSGRVWAAERLHL
VGSNIGRGPGPIHYRDIEAWRFGHGG
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaactgcccgacgccatgaccggacccgccgtggacgggcgtggacaggccgcc
acgatccgtgtgttcctggcgctcgccccgcccgacgatgccaaggacgagctggagcgg
gccctgcgtccggcctatgcggcccacccccgcctgcggtggaaccggatcgaggactgg
cacatcaccctggcgttcctcggggaactccccctggccgccgtgccgccgctgatgccc
ccgctctccgggctggcggcgcggcgtcggcccctgcggctggcgctgcgcggcggtggg
cacttcgacgagcgggtcctgtggagcgggatcgacggggacctcgaagggctgcaccgg
ctcgccaccgacgtacgcgagctggtccgggcctgcggtgtctccttccccgaacggccg
ctgcggccccatctgacgctggcccgctcccgccggggcgaccagggtgggacggtggag
atcgccgcggggctcgctccgttctcgggccgggtctgggcagccgaacggctgcatctg
gtgggcagcaacatcggccggggtccggggccgatccactatcgagacattgaagcgtgg
cgtttcggccacgggggctga
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