KEGG   Streptomyces cavourensis: CVT27_08855
Entry
CVT27_08855       CDS       T07023                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03086  RNA polymerase primary sigma factor
Organism
scav  Streptomyces cavourensis
Pathway
scav02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:scav00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CVT27_08855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scav03021]
    CVT27_08855
Transcription machinery [BR:scav03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CVT27_08855
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_28 LexA_DNA_bind KORA DUF2316
Other DBs
NCBI-ProteinID: ATY95581
LinkDB
Position
complement(1997332..1998510)
AA seq 392 aa
MQTRTVTSTTEHMSVIPAQNRAVRHPENPREDLRESPQESPRENHPETTAADGPPARATE
AVMSASEAVMEEAEDAPEPREARNRAENGGPTSDLFRQYLREIGRIPLLTAAEEVELARR
VEAGLFAEERLANTPDLDSRLAGDLDRLVVMGRTAKRRLIEANLRLVVSVAKRYVGRGLT
MLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELI
NRVVRVQRRLLQERGYEPTADEVAAQLDLTPERVTEVLRLAQEPVSLHAPVGEEDDVSFG
DLIEDGDAASPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLDDGRPRTLEEIGRIF
GVTRERIRQIESKTLSRLRDHAFADQLRGYLD
NT seq 1179 nt   +upstreamnt  +downstreamnt
gtgcagacccggaccgtgacgagcacgaccgagcacatgtcggtgattcccgcacagaac
cgggccgtccgccacccggagaacccccgggaggacctgcgggagagccctcaggaaagc
ccccgggagaaccacccggagaccaccgcggccgacggcccgcccgcgcgggccaccgag
gcggtcatgagcgcatccgaggccgtcatggaggaagcggaagacgcccccgagccccgc
gaggcgcggaaccgggcggagaacggcggccccacctccgacctcttccggcagtatctg
cgcgagatcggccgcatcccgctcctcaccgccgccgaggaggtcgagctggcccgccgc
gtggaggccgggctcttcgcggaggagcggctcgccaacaccccggatctggactcccgg
ctcgcgggcgacctggaccggctcgtcgtcatgggccgcaccgccaagcgccggctcatc
gaggccaacctgcgcctggtcgtctccgtcgccaagcggtacgtggggcgcgggctgacc
atgctcgacctggtccaggaggggaacctcgggctgatccgggcggtggagaagttcgac
tacgcccggggctacaagttctccacgtacgcgacctggtggatccgccaggcgatgtcc
cgcgccctggccgaccaggcccgtacgatccgcgtccccgtccatgtcgtggagctgatc
aaccgcgtggtccgcgtccagcgccggctgctccaggagcgcgggtacgaacccaccgcc
gacgaggtggccgcccagctcgacctgaccccggagcgggtcaccgaagtcctgcgcctg
gcccaggagccggtctccctgcacgcccccgtcggggaggaggacgacgtctccttcggt
gacctcatcgaggacggcgacgccgcctcacccgtcgagtccgccgccttcctgctgctg
cgcgagcacctggaggcggtcctctccaccctgggggagcgcgaacgcaaggtcgtccag
ctccggtacggcctggacgacgggcggccccgcaccctggaggagatcggccggatcttc
ggcgtgacgcgcgaacgcatccgccagatcgagtccaagaccctcagcaggctgcgggac
cacgccttcgccgaccagctccgcggctacctcgactga

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