Streptomyces cavourensis: CVT27_16990
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Entry
CVT27_16990 CDS
T07023
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scav
Streptomyces cavourensis
Brite
KEGG Orthology (KO) [BR:
scav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scav03021
]
CVT27_16990
Transcription machinery [BR:
scav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVT27_16990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
HTH_Crp_2
HTH_24
Sigma70_ECF
MarR
DUF7343
KORA
DUF134
Motif
Other DBs
NCBI-ProteinID:
ATY96970
UniProt:
A0AAD0Q6V3
LinkDB
All DBs
Position
complement(3872400..3873266)
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AA seq
288 aa
AA seq
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MSEEQGSSKVLTLTKSVPAPAVLTSSPEAIDTRTLSRSLFLRLAALGPASGPDGTDSPER
TYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAM
PTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKTSDELAQKLDRSPTVPELARALGVSEE
DVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDAALEGVEYRESLKPLLAKLAP
RERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaacagggcagctcgaaggtgctcacgctcaccaagagcgtgccggcaccc
gccgtgctcaccagctcgccggaagccatcgacacccgcactctgtcccgctccctgttc
ctgcggctcgccgcgctcggccccgcctcgggtcccgacggaacggacagcccggagcgg
acctatgtgcgggacacactcatcgagctgaacctcccgctggtgcggtacgccgcggcg
cggttccgtagccgcaacgaaccgatggaggacatcgtccaggtcggcaccatcggcctg
atcaaggcgatcgaccggttcgactgcgaacggggcgtggagttcccgaccttcgcgatg
ccgaccgtcgtcggggagatcaaacgcttcttccgcgacacctcctggtccgtccgggtc
ccccgccgcctccaggagctgcggctcgcactgacgaagaccagcgacgagctggcccag
aagctcgaccgctccccgaccgtgcccgagctggcccgggccctcggcgtctccgaggag
gacgtggtcgacggcctcgccgtcggcaacgcgtacaccgcctcctccctcgactccccc
tcccccgaggacgacggcggcgagggctccctcgcggaccgcctcggctacgaggacgcg
gcgctggagggcgtcgagtaccgggagtcgctgaagcccctgctggccaaactcgccccg
cgcgagcggcagatcatcatgctgcggttcttcgccaacatgacccagtcgcagatcggc
gaggaggtcggcatctcccagatgcacgtctcccggctgctcacccgcaccctcgcccag
ctccgggaagggctcatctccgactga
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