Streptomyces cavourensis: CVT27_16995
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Entry
CVT27_16995 CDS
T07023
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scav
Streptomyces cavourensis
Brite
KEGG Orthology (KO) [BR:
scav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scav03021
]
CVT27_16995
Transcription machinery [BR:
scav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVT27_16995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
NirdL-like_HTH
HTH_Crp_2
HTH_17
MarR
HTH_3
HTH_5
DUF134
DUF7343
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ATZ00046
LinkDB
All DBs
Position
complement(3873501..3874307)
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AA seq
268 aa
AA seq
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MQPETPDPAAPPARTRGADTRALTQVLFGQLKGLEPGTPEHGRVRAALIEANLPLVRYAA
ARFRSRNEPMEDVVQVGTIGLINAIDRFDPERGVQFPTFAMPTVVGEIKRYFRDNVRTVH
VPRRLHELWVQVTGATEDLTTAHGRSPTTAEIAERLKISEDEVLACIEAGRSYHATSLEA
AQEGDGLPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQISA
ELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atccagcccgagacccccgaccccgccgccccgcccgccaggacccgcggggcggacacc
agagccctcacccaggtgctcttcgggcagctcaaggggctggagcccgggaccccggag
cacgggcgggtccgggccgccctcatcgaggcgaacctgccgctggtgcggtacgccgcc
gcccgcttccggagccgtaacgagccgatggaggacgtcgtccaggtcggcaccatcggg
ctcatcaacgccatcgaccgcttcgacccggaacgcggcgtccagttccccaccttcgcg
atgcccaccgtcgtcggcgagatcaagcgctacttccgcgacaacgtccgcaccgtccac
gtcccccgccggctgcacgagctctgggtccaggtcaccggcgccaccgaggacctgacg
accgctcacgggcgctcccccaccaccgccgagatcgcggaacggctgaagatctccgag
gacgaggtgctcgcctgcatcgaggccggacgctcgtaccacgccacctccctggaggcc
gcccaggagggcgacgggctccccgggctcctcgaccggctcggttacgaggaccccgcg
ctcgccggtgtcgagcaccgcgacctcgtgcgccacctcctcgtccagctccccgagcgc
gagcagcgcatcctcctcctgcgctactactccaacttgacccagtctcagatcagcgcc
gaactgggcgtctcccagatgcatgtgtcaagactcctggccagaagtttcgcccggctg
aggtccgcaaacaggatcgaggcgtaa
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