Streptomyces cavourensis: CVT27_19125
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Entry
CVT27_19125 CDS
T07023
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
scav
Streptomyces cavourensis
Brite
KEGG Orthology (KO) [BR:
scav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scav03016
]
CVT27_19125
Enzymes [BR:
scav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CVT27_19125
Transfer RNA biogenesis [BR:
scav03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CVT27_19125
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ATY97321
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All DBs
Position
4308618..4309256
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AA seq
212 aa
AA seq
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MSSRDPGRERGRHPAPRPVHRRPSQRLFAAVLPPPSAVAELRTAVAPLHALPGAQDLRWT
RPEDWHVTLAFYGDVPDEDVRPELEARLGRAAHRTEPFRLRVHGAGRFGGRALWAGAAGG
LDALRLLAERADAAGRRSGVPLEEHRRFTPHLTLARSRAGAELRPFTEALAGFEGQGWEA
GELSLVRSELPHSGVPGERPRYAVVRAWALGR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgcgaccccggccgtgagcgcggtcggcaccccgccccgcgccccgtccac
cgccgcccctcccagcgcctcttcgccgccgtcctgccaccgccctccgccgttgccgaa
ctccgtacggcggtggcgcccctccacgccctccccggcgcgcaggacctgcgctggacg
cggcccgaggactggcacgtcacgctggcgttctacggggacgtgccggacgaggacgta
cggccggagctggaggcgcggctggggcgggccgcgcaccggaccgagcccttccgcctc
cgcgtccacggggcggggcgcttcggcgggcgggcgctctgggccggggcggcgggcggg
ctcgacgcgctgcggctgctggccgagcgcgcggacgcggcgggccggcggtccggggtg
ccgctggaggagcaccgccgcttcaccccgcacctcacgctggcccggagccgggcgggg
gcggagctgcggccgttcaccgaggcgctggcggggttcgaggggcaggggtgggaggcc
ggtgagctgagtctcgtacggagtgaactgccgcactcgggggtgccgggggagcggccg
cgctatgcggtggtgcgggcctgggcgctggggcggtga
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