Streptomyces cavourensis: CVT27_21525
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Entry
CVT27_21525 CDS
T07023
Name
(GenBank) RNA polymerase
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
scav
Streptomyces cavourensis
Brite
KEGG Orthology (KO) [BR:
scav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scav03021
]
CVT27_21525
Transcription machinery [BR:
scav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVT27_21525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ATY97740
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Position
4816327..4817265
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AA seq
312 aa
AA seq
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MLGDDAELTAAVLAAQDGDEDAFRAVYRAVQPRLLGYIRTLVGEPDAEDVASEAWLQIAR
DLDRFSGDADRFRGWAARIARNRSLDHLRMRSRRPAIGGDETELTGRPAESDTAGDAMEA
LDTDRTMSLIAQLPQDQAEAVVLRVVVGLDAKSAAQTLGKRPGAVRTAAHRGLKRLAELL
SEHQPDTPRPAAVPPAPAGGFPAASGGRSGARTRSGPASSGEALTGGGSVTGGGPGLAGG
SGLAGGPGLGGGSDAGGRASAQGAGSDAGQGGVGGAELGAVPSQRPGRGGPAAPAGVTPG
VTHSRPWTQRDM
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgctgggggacgacgcggagctgaccgccgcggtgctcgcggcacaggacggggacgag
gacgctttccgtgctgtgtaccgcgctgtgcagccacggttgttgggttacatacggacg
ctggtgggggagccggacgccgaggacgtggcgtccgaggcctggctccagatagcgcgc
gacctcgaccggttcagcggggacgccgaccggttccgggggtgggcggcccggatcgcc
cgcaaccgttcgctcgaccatctgcggatgcgcagccgccgccccgcgatcggcggcgac
gagaccgagctgaccggccggcccgccgagtccgacaccgccggtgacgccatggaagcg
ctcgacaccgaccgcacgatgtccctcatcgcccagctcccgcaggaccaggccgaggcc
gtcgtcctgcgcgtggtcgtcgggctggacgccaagagcgccgcccagaccctcggcaag
cgccccggcgccgtacggaccgccgcccaccgcggtctcaagcgcctcgccgaactcctc
tcggaacaccagcccgacacgccccgccccgccgccgtgccgcccgcgcccgccgggggg
tttcccgccgcgtccggtggccgttccggcgcccgcacccgtagcgggcccgcgtccagc
ggtgaggccctgaccggtggcggttccgtgaccggtggtgggcccggcctcgccggtggt
tccggcctcgcgggcggccccggcctcggcggtggttccgatgccggtggtcgggcctcg
gcgcagggggccgggagcgacgcaggtcagggtggtgtcggtggtgcggaactcggtgcc
gtaccctctcagcgccccggtaggggcggtccggcggcgccggccggggtcactcccggt
gtgacgcattcgcgaccgtggacgcagagggacatgtga
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