Streptomyces cavourensis: CVT27_25915
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Entry
CVT27_25915 CDS
T07023
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scav
Streptomyces cavourensis
Pathway
scav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVT27_25915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scav03019
]
CVT27_25915
03016 Transfer RNA biogenesis [BR:
scav03016
]
CVT27_25915
Enzymes [BR:
scav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CVT27_25915
Messenger RNA biogenesis [BR:
scav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CVT27_25915
Transfer RNA biogenesis [BR:
scav03016
]
Prokaryotic type
tRNA degradation factors
CVT27_25915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
PCB_OB
Cauli_AT
CdsD_C
Motif
Other DBs
NCBI-ProteinID:
ATY98531
UniProt:
A0AAD0VGW3
LinkDB
All DBs
Position
5823218..5825431
Genome browser
AA seq
737 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKRPKDN
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGATRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLDDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEIVAAGLEAAKPFIKALC
KAQSDLASKAAKPVGDFPVFLDYQDDVLDALAKAVTPELKQALTIAGKQERETELDRVKE
IAAEKLLPEFEGREKEISAAYRALTKKLVRERVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAAVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAQQGSQAEAARATINAIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEEDEKKDDTDK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacgggacgttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcatccaagcggcccaaggacaac
ctggacttcttccccctcacggtggacgtcgaggagcggcagtacgccgcaggcaagatc
cccggctccttcttccgccgggagggccgcccgtccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtggtcgcgatcaacgcc
gcctcctgctccacccagctcgcgggcctgcccttctccggcccgatcggcgccacccgc
gtcgccctgatcaagggccagtgggtcgccttcccgacccacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgccggccgtgtcctggacgacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctcgtcaaggacggcgccgaggctccc
accgaggagatcgtcgccgccggtctggaagccgcgaagcccttcatcaaggcgctctgc
aaggcccagtcggacctggcgtccaaggccgccaagcccgtcggtgacttcccggtcttc
ctggactaccaggacgacgtcctggacgcgctggccaaggccgtcacgcccgagctgaag
caggcgctcaccatcgccggcaagcaggagcgcgagaccgagctggaccgcgtcaaggag
atcgccgccgagaagctcctcccggagttcgagggccgcgagaaggagatctccgccgcc
taccgcgcgctgaccaagaagctggtccgcgagcgcgtcatcaaggacaaggtccgcatc
gacggccgtggcgtcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctcttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggtgcgctcgccgagcgcgccatcgtgccggtcctgccg
acccgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctcaaggccgccgtcgccggtatcgccatgggcctgatctcgcaggagatcgacggcaag
acccactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggtaccaagcagttcgtgaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgtgacgcgcgtctgcac
atcctggacgtcatgaacgaggccatcgacgtcccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
acgatctacatcggtgcgcagcagggctcgcaggccgaggccgcccgcgccacgatcaac
gccatcgccaacccgaccatgccggaggtcggtgagcgctacctgggtacggtcgtcaag
acgaccaccttcggcgcgttcgtctcgctcatgccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcggc
gtcggcgccaaggtccaggtcgagatcgcggagatcgactcccgcggcaagctctccctc
atcccggtcatcgagggtgaagaggacgagaagaaggacgacaccgacaagtga
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