Streptomyces cathayae: PYS65_05440
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Entry
PYS65_05440 CDS
T09946
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scay
Streptomyces cathayae
Pathway
scay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PYS65_05440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scay03000
]
PYS65_05440
03400 DNA repair and recombination proteins [BR:
scay03400
]
PYS65_05440
Enzymes [BR:
scay01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PYS65_05440
Transcription factors [BR:
scay03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PYS65_05440
DNA repair and recombination proteins [BR:
scay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PYS65_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
HHH
Motif
Other DBs
NCBI-ProteinID:
WGD39625
LinkDB
All DBs
Position
complement(1195438..1196946)
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AA seq
502 aa
AA seq
DB search
MQKGMHTDTERCVRAVRSKDARFDGWFFTAVLTTGIYCRPSCPAVPPKPENMVFQPSAAA
CQQAGFRACKRCRPDTSPGSPEWNQRADAVARAMRLIADGTVDREGVPGLAARLGYSTRQ
VERQLLAELGAGPLALARAQRAQTARLLIETTALPMTEIAFAAGFSSVRSFNDTVREVFA
LAPSDLRARAPRRTPGTPTSAPGGTPGALSLRLPFRAPLNPDNLFGHLAATAVPGVEEWR
DGAYRRTLRLPYGHGVVALAPRPDHIACRLTLTDPRDLTVAISRCRRLLDLDADPVAVDD
RLRTDPVLAPLVDKAPGRRVPRTVDEAEFALRAVLGQQVSTAAARTHAARLVVAHGEPVD
DPDPEGGLTHLFPSPEALADLDPETLAMPRTRRTTFTTLVRRLADGDLRLGVGSDWPETR
EKLLALPGFGPWTADVIALRALGDPDAFLPTDLGIRRAARELGLPSTPAALTARAAAWRP
WRAYAVQYLWATDDHPINFLPA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggggatgcacaccgacaccgaacgctgcgtgcgggccgtccggtccaaggac
gcgcggttcgacggctggttcttcaccgccgtcctgaccaccggcatctactgccggccc
agctgtccggcggtaccgcccaagcccgagaacatggtcttccagccgagcgcggcggcc
tgccagcaggcggggttccgggcctgcaagcggtgccgccccgacaccagccccggatcc
ccggagtggaaccagcgcgccgacgcagtggcccgcgccatgcggctgatcgccgacggg
accgtggaccgggagggcgtgcccggcctcgccgcccggctcggctacagcacccggcag
gtggaacgccaactgctcgccgaactgggcgccggccccctcgccctcgcccgggcccag
cgcgcccagaccgcgcggctgctcatcgagacgacggccctgccgatgacggagatcgcc
ttcgccgccgggttctcctccgtccgctccttcaacgacacggtgcgcgaggtcttcgcc
ctcgccccgagcgacctgcgtgcccgtgcgccgcggcgcactcccggcacccccacgagc
gcccccggcggcactcccggcgcgctgtccctgcgcctgccgttccgcgccccgctcaac
cccgacaacctcttcggccacctcgccgcgaccgccgtacccggcgtggaggagtggcgg
gacggcgcctaccggcgcacgctgcggctgccgtacgggcacggcgtcgtggccctggcc
ccgcggcccgaccacatcgcctgccgcctcaccctcaccgacccgcgcgacctcaccgtc
gccatcagccgctgccgccggctgctcgacctggacgccgacccggtggccgtcgacgac
cggctgcgcaccgacccggtgctcgccccgctggtcgacaaggcgcccggccgccgggtc
ccgcgtacggtcgacgaggcggagttcgccctccgggccgtgctcggccagcaggtctcc
acggccgccgcccgcacccacgcggcccggctggtcgtcgcgcacggcgaaccggtggac
gacccggaccccgaaggcggcctcacccacctcttcccgtctcccgaggcgctcgccgac
ctggaccccgagaccctggccatgccccgcacccgccggaccaccttcaccaccctggtc
cgccggctcgccgacggcgacctccggctgggcgtcgggagcgactggcccgagacccgc
gagaaactcctcgccctgcccggcttcggcccctggacggccgacgtcatcgccctgcgc
gccctgggcgaccccgacgccttcctccccaccgacctcggcatccgccgcgccgcccgc
gaactcggcctgccgtccaccccggccgcgctcaccgcacgcgcggcggcctggcggccc
tggcgggcgtacgcggtccagtacctgtgggcgacggacgaccacccgatcaacttcctg
ccggcctga
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