Streptomyces cathayae: PYS65_08130
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Entry
PYS65_08130 CDS
T09946
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
scay
Streptomyces cathayae
Brite
KEGG Orthology (KO) [BR:
scay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scay03016
]
PYS65_08130
Enzymes [BR:
scay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PYS65_08130
Transfer RNA biogenesis [BR:
scay03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PYS65_08130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Alpha_GJ
Motif
Other DBs
NCBI-ProteinID:
WGD40100
LinkDB
All DBs
Position
1802497..1803795
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AA seq
432 aa
AA seq
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MTDAHDTAADSSLRTTGGAPPDDNGSPATEAPTPLLEPREGIPPVITGGAALAEVTAAFA
AGTGPVAVDAERASGYRYGQRAYLVQLRRAGAGSALIDPVACPDLSGLGQALSGAEWVLH
AATQDLPCLREIGMLPGRLFDTELAGRLAGFPRVGLGAMVENVLGFVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRHALEKELDRQGKLEWALQEFEAIASAPPPEPRKDPWRRT
SGMHKVRRRRQMAVVRELWQVRDRIAQRRDVSPGKVLSDAAIVEAALALPVNVHALGALN
GFGPRVGRRQLEQWQTAVDRARALPESQLPQPGQPVTGPPPPRAWADKDPVAAARLSAAR
AGVSALAERLNMPQENLITPDTVRRVCWEPPQSADRESVAAVLAGYGARPWQVEQVTPVL
VTALVSGGSGGL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccacgacaccgcagcagacagctccctgcgaaccaccggaggcgcccct
ccggacgacaacggatcacctgctacggaggcgccgacccccttgctcgaaccgcgtgag
ggcatcccgcccgtgatcacgggcggggccgccctcgccgaggtgaccgccgccttcgcc
gcgggcaccggaccggtcgccgtcgacgccgagcgcgcctccggctaccgctacggccag
cgcgcctacctcgtccagctgcgccgtgcgggcgccgggtccgccctgatcgaccccgtc
gcctgcccggacctgtccggcctgggccaggcgctgtccggcgccgagtgggtgctgcac
gccgccacccaggacctgccctgcctgcgcgagatagggatgctgcccggccgcctcttc
gacaccgaactggccggacgcctggccggcttcccccgggtcggcctcggcgcgatggtc
gagaacgtgctcggcttcgtcctggagaagggccactccgccgtcgactggtccacccgc
ccgctgcccgagccctggctgcgctacgccgccctcgacgtcgagctcctggtcgacctg
cggcacgccctggagaaggaactggaccggcagggcaaactggagtgggccctgcaggag
ttcgaggcgatcgcctcggcgccgccgccggagccccgcaaggacccctggcggcgcacc
tccggcatgcacaaggtgcgcaggcgccggcagatggccgtcgtcagggagctgtggcag
gtccgggaccggatcgcgcagcgccgggacgtctccccgggcaaggtgctctccgacgcc
gccatcgtcgaggccgcgctcgccctcccggtcaacgtccacgccctgggcgcgctgaac
gggttcgggccgcgggtggggcggcgccagctggagcagtggcagacggccgtcgaccgg
gcgagggcactgcccgagtcccagttgccgcagcccggacagccggtgaccggtccgccg
ccgccgcgcgcctgggcggacaaggacccggtggccgcggcccggctctccgcggcccgc
gcgggggtgagcgcgctcgccgaacggctgaacatgccgcaggagaacctgatcaccccg
gacacggtgcgcagggtgtgctgggagcccccgcagtcggccgacagggagtccgtcgcg
gcggtgctggccgggtacggggcgcggccgtggcaggtggaacaggtgaccccggtgctg
gtcaccgcactggtctccggcggttcgggagggctctga
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