Streptomyces cathayae: PYS65_09055
Help
Entry
PYS65_09055 CDS
T09946
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scay
Streptomyces cathayae
Pathway
scay00040
Pentose and glucuronate interconversions
scay01100
Metabolic pathways
scay02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PYS65_09055
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PYS65_09055
Enzymes [BR:
scay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PYS65_09055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
WGD40267
LinkDB
All DBs
Position
complement(1997379..1998917)
Genome browser
AA seq
512 aa
AA seq
DB search
MKRSAALRFHATLATAALAAATGLVVAMPSASAATGSATGYATQNGGTTGGAGGQTVRAT
TGTAIHTALCNRASSSTPIIIEVQGTINHGNTSKVSGSSCNTAAGVIELKQISNVTIVGV
GSGAVFDQLGIHIREARNIIIQNVTVRNVKKSGSPTSNGGDAIGMETDVRNVWVDHVTLE
ASGGESEGYDGLFDMKDNTQYVTLSYSTLRNSGRGGLIGSSESDRSNGNITFHHNLYENI
DSRAPLLRGGIAHMYNNHYKRLNDSGINSRAGARAKVDNNYFEDSKDVLGTFYTSEAGYW
QVSGNIFDNVTWSSRSGDNQPAGPNPTSNTSVSIPYSYKLDAANCVPDVVNRTAGANKGL
KVSDGNCTPQNPTPTDPTDPTDPTDPTDPPTGTNLSLGAGADGSSKAGGTSYGNVIDGNL
GTYWSPSGSTGSVSVKWSSDATVSKVNIREASGSEGTVRSWRLLNHDTGAVLASGSSAGA
VSFARTSLRKITFEVTGASGTPRIAEFETYGG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatcagcagcactgcggttccacgcgacgctggccacggcggccctcgcggcc
gcgaccggactggtggtggcgatgccctcggcgtcggccgcgaccggcagtgccaccggc
tacgcgacccagaacggcgggaccaccggcggcgcgggcgggcagacggtccgggccacc
acgggcaccgcgatccacaccgccctgtgcaaccgtgccagcagcagcaccccgatcatc
atcgaggtccagggcaccatcaatcacggcaacaccagcaaggtgtcgggcagcagctgc
aacaccgccgccggtgtgatcgagctcaagcagatcagcaacgtcacgatcgtcggggtc
ggcagcggtgccgtcttcgaccagttgggcatccacatccgggaggcccgcaacatcatc
atccagaacgtgaccgtccggaacgtcaagaagtccggctcgcccacctccaacggcggc
gacgccatcggcatggagaccgacgtccgcaacgtctgggtcgaccacgtcaccctggag
gcgtccggcggggagtcggagggctacgacggcctcttcgacatgaaggacaacacccag
tacgtgaccctgtcgtacagcaccctgcgcaactccggccgcggcggcctcatcggatcc
agcgagagcgaccgctccaacggcaacatcacgttccaccacaacctgtacgagaacatc
gactcccgtgcaccgctgctgcgcggcggcatcgcccacatgtacaacaaccactacaag
cgcctcaacgactccggcatcaactcccgggccggggcgcgcgccaaggtggacaacaac
tacttcgaggactccaaggacgtcctcggcaccttctacaccagcgaagccggctactgg
caggtcagcggcaacatcttcgacaacgtgacctggtcctcccgcagcggcgacaaccag
cccgccggccccaacccgacctccaacacctcggtctccatcccctactcctacaagctc
gacgccgccaactgcgtaccggacgtggtgaaccggacggcgggcgccaacaagggcctg
aaggtgtcggacggcaactgcacgccgcagaaccccaccccgaccgaccccacggacccc
accgacccgacggacccgaccgacccccccaccgggaccaacctcagcctcggtgccggt
gctgacggctccagcaaggccggcgggacgagctacggcaacgtgatcgacggcaacctc
ggcacctactggtcgccgagcggctcgaccggttccgtctcggtcaagtggtcgtccgac
gccacggtgtcgaaggtcaacatccgggaggcgtcgggctccgagggcaccgtccggtcc
tggcggctcctcaaccacgacaccggtgccgtcctggcctccggcagcagtgcgggcgcc
gtctccttcgcgcggacctcgctgcgcaagatcaccttcgaggtcaccggcgcgagcggc
acgccgcggatcgccgagttcgagacctacggcggataa
DBGET
integrated database retrieval system
