Streptomyces cathayae: PYS65_11890
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Entry
PYS65_11890 CDS
T09946
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scay
Streptomyces cathayae
Brite
KEGG Orthology (KO) [BR:
scay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scay03021
]
PYS65_11890
Transcription machinery [BR:
scay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PYS65_11890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
MarR_2
HTH_24
Sigma70_ECF
NirdL-like_HTH
MarR
HTH_3
IF2_N
HTH_Crp_2
HTH_AraC
GerE
DUF4423
Motif
Other DBs
NCBI-ProteinID:
WGD40793
LinkDB
All DBs
Position
2657580..2658716
Genome browser
AA seq
378 aa
AA seq
DB search
MRDEERGTRGLPAERMPGGIDGIDAIPEQARPHPEDDSAQAGPPGGGQSGGAARSTPEAG
RRPGASPGHQEAPARARPTAGDEASARGRATGGTMNEHERHAESEVPRTPSAQGVRHTPV
THGAQRDPQDRSGARALFLELRTLPDGSPEYAELRNRLVRMHLPLVEHLARRFRNRGEPL
DDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRL
SLTTATAELSQLHGRSPTVHELAERLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAV
ADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVS
RLLARTLAQLREKLLVEE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacgaagaacgcggcacacgggggctgcctgccgagcggatgccgggcggtatc
gacggcatcgacgccatcccggaacaggcccggccccatccggaggacgactccgctcag
gccggcccgccgggcggcgggcagtccggcggtgccgcacggagtacgcccgaggccggg
cggcggcccggggcctcccccggacaccaggaagccccggcacgggcgaggccgacggcg
ggggacgaggcgagcgctcggggaagggcgacgggcgggacgatgaacgagcacgagcga
cacgccgagagcgaggtgccgcggacgccgagcgcacagggcgtccggcacaccccggtg
acgcacggcgcgcagcgcgacccgcaggaccgcagcggggcacgcgccttgttcctcgag
ctgcgcaccctgccggacggcagtcccgagtacgcggagctgcgcaaccggctggtccgc
atgcatctgccgctcgtcgagcacctcgcgcgccgtttccgcaaccgcggggaaccgctg
gacgacctgacccaggtcgccaccatcggtctgatcaagtcggtcgaccgcttcgacccg
gatcgcggcgtggagttctcgacgtacgcgaccccgacggtcgtcggcgagatcaagcgg
cacttccgcgacaagggctgggcggtgcgcgtgccgcgccggctgcaggagctgcgcctg
tcgctgacgactgccaccgccgagctctcgcaactgcacggccggtcccccacggtgcac
gagctcgccgagaggctggcgatctcggaggaggaggtcctggagggcctggagtccgcc
aacgcgtactccacgctgtccctggacgtccccgacaccgacgacgagtccccggcggtc
gccgacaccctcggcgccgaggacgaggcgctggagggcgtggagtaccgggagtcgctc
aagccgctgctggaggatctgccgccgcgcgagaagcggatcctgctgctgcgcttcttc
ggcaacatgacccagtcgcagatcgcccaggaggtcggcatctcgcagatgcacgtctcc
cggctgctggcccgcacgctggcgcagctgcgcgagaagctgctcgtggaagagtga
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