Streptomyces cathayae: PYS65_12160
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Entry
PYS65_12160 CDS
T09946
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scay
Streptomyces cathayae
Pathway
scay03420
Nucleotide excision repair
scay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PYS65_12160
03430 Mismatch repair
PYS65_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scay03400
]
PYS65_12160
Enzymes [BR:
scay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYS65_12160
DNA repair and recombination proteins [BR:
scay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYS65_12160
MMR (mismatch excision repair)
Other MMR factors
PYS65_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WGD40842
LinkDB
All DBs
Position
complement(2714059..2717649)
Genome browser
AA seq
1196 aa
AA seq
DB search
MPAPLTDPDQLKELLGIPFTPEQTACIVAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVKAGVTDPDPLDPDNPPGEPVISTYHAFAGRLL
TDHGLRLGLEPTSRLLADATRYQLAARVLREAPGLYPALTRSFPDLVGDLLTLDGELSEH
LVRPEDLRDHDTELLRTLENTRLTNADLRKVPEAAAARRELADLVLRYRAAKRERDLLDF
GDQIALSARLARIPDVGRVLRDEFRVVLLDEYQDTSVAQRVLLAGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFARADGGPATRQSLSENRRSGGRLLDLANGLADPLRAM
HAGVEALRPAPGAERDGTVRCALLHTHAEELDWIADSIAHLVRTGKAPGEIAVLCRTATD
FAQIQGALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVTHARVDGEDDPDRRLAAAVEGVDPAEVISLADALDTFLETPLDGP
GDDGLPFSPDARVRFARLATELRDLRRSLADPLMDVLHRVLAVTGLEIELSASPHALAAR
RRETLSNFLDVAASFAAGDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHKS
KGLEWDVVAVPGLVTGTFPSGQGREKWTAQGKVLPHGLRGDADTLPDVGSWDSRGLKAFH
DAMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSAFLQALHDHCAAGHGE
IEAWADAPAEGEENPALHRAAQDQAWPLPLDEDALARRRAAAETVLAHLESLAGDPDGHP
TAVHAPGTYADPDWPPPPDDEHLPPEEGDPFTDDDSGDWDSWTTDRPTTDRPTTDGGPDD
GGPDDGGPDDGRPDDGRPDGGRPVVPLRIPHQAPPPEPAPPRLTPEEARTVASWDRDLDA
LTGELLRARDSVTEVLLPASLTTSQLLRLAADPDGFAQELVRPMPRPPQPAARRGTRFHA
WVESRFEELTLPMLEPDELPGSEAEIADEHDLAALKDAFERTEYARRTPYRVEAPFQLAI
AGRVVRGRIDAVYRQATGEKAAGGEGDAGDGTTYEIVDWKTHRNRTADPLQLAVYRIAWA
EQQGVPLGSVTAAFLYVRTGEVVRPDALPDREALERLLLEEPSGEIPHSEDTSAGR
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcacctctcaccgaccccgatcagctcaaggaactcctcggcatccccttcacc
ccggagcagacggcctgcatcgtcgcgccgcccgccccccaggtgatcgtggccggagcc
ggctcgggcaagacgacggtgatggcggcgcgcgtggtgtggctggtcggcaccggccag
gtcgccccggagcaggtgctcggcctcaccttcaccaacaaggccgccggcgaactcgcc
gaacgcgtccgcaaggcactggtcaaggccggcgtgaccgaccccgaccctctcgacccg
gacaacccgccgggcgaaccggtgatctccacctaccacgccttcgcgggccgcctcctg
accgaccacgggctgcgcctcggcctcgaaccgacctcccgcctcctcgccgacgcgacc
cgctaccagctcgccgcgcgggtgctgcgcgaggctcccggcctctacccggcactgacc
cgctccttccccgacctggtcggcgacctcctcaccctcgacggcgaactctccgagcac
ctcgtacggcccgaggacctgcgcgaccacgacaccgaactgctgcgcaccctggagaac
acccggctcaccaacgccgacctgcgcaaagtgcccgaagcggccgccgcccggcgcgaa
ctggccgacctcgtcctgcgctaccgggccgccaaacgcgaacgcgacctgctcgacttc
ggcgaccagatcgccctctcggcccggctcgcccggatccccgacgtgggccgcgtcctg
cgcgacgagttccgcgtggtcctcctcgacgagtaccaggacacctcggtcgcccagcgc
gtcctgctggccggcctgttcggcggcggcaccggccacccggtgaccgccgtcggcgac
ccctgccaggcgatctacggctggcgcggcgcctccgtcgccaacctcgacgacttcccc
gagcacttcgcccgggccgacggcggccccgccacccgtcagtcgctcagtgagaaccgc
cgcagcggcggccgcctgctggacctcgccaacggcctcgccgaccccctgcgggccatg
cacgccggagtggaagccctccgcccggccccgggagccgaacgcgacggcaccgtccgc
tgcgccctgctgcacacccatgccgaggaactcgactggatcgccgactccatcgcccac
ctcgtacgcaccgggaaggcacccggcgagatcgccgtcctgtgccgcacggcgaccgac
ttcgcccagatccagggcgccctcgtcgcccgggacgtccccgtggaggtcgtcggcctg
tccgggctgctgcacctgcccgagatcgccgacctggtcgccgtctgcgaggtcctccag
gaccccggggccaacgcctccctggtccgcctgctgaccggcccgcgctggcgcatcgga
ccccgcgacctcgccctgctcggccgccgtgcgcgactgctcgtgacccacgcgcgcgtg
gacggcgaggacgaccccgaccgccgtctcgccgcagccgtcgaaggggtcgacccggcc
gaagtgatctcactcgccgacgccctcgacacgttcctggagacacccctggacgggccg
ggcgacgacgggctgcccttctcaccggacgcgcgcgtgcggttcgcccggctggccacc
gaactgcgcgacctgcgccgctccctggccgacccgctgatggacgtcctgcaccgcgtc
ctcgccgtcaccggtctggagatcgaactgtcggcgtccccgcacgccctcgccgcccgc
cgccgcgagaccctgtccaacttcctcgacgtcgccgcctccttcgccgccggggacggc
gaggcgaccctgctcgccttcctcggcttcctgcgcaccgccgcccagtacgagaagggc
ctcgacaacgcgctgccgggtggcgagaacaccgtcaaggtcctcaccgcccacaagtcc
aagggcctggagtgggacgtggtggccgtccccggactggtcaccggtacgttccccagc
ggccaggggcgcgagaagtggaccgcacagggcaaggtgctgccccacggactgcgcggc
gacgccgacaccctgcccgatgtcgggtcctgggactccaggggcctgaaggccttccac
gacgccatgaaggagcaccagcacaccgaggagctccgcctcggctacgtcaccttcacc
cgcccccgctcgctgctgctcggctccggccactggtgggggccctcgcagaagaaaccg
cgcgggccgtccgccttcctgcaggccctccacgaccactgcgccgccggacacggcgag
atcgaggcctgggcggacgcgcccgccgagggcgaggagaaccccgccctgcaccgggcc
gcccaggaccaggcgtggcccctcccgctggacgaggacgccctcgcccgccgccgcgcc
gccgccgagaccgtcctggcccacctggaaagcctcgccggcgacccggacggccacccc
acggccgtccacgctcccggcacgtacgccgatccggactggcccccgccgccggacgac
gagcacctcccgcccgaggagggcgaccccttcacggacgacgactccggcgactgggac
tcctggaccaccgaccgccccaccaccgaccgccccaccaccgacggcggtcccgacgac
ggcggtcccgacgacggcggtcccgacgacggccgtcccgacgacggccgtccggacggc
ggccggcccgtcgtcccgctccggatcccgcaccaggcgccccctccggagcccgcccca
ccccggctcacccccgaggaagcccgcaccgtcgcctcctgggaccgcgacctcgacgcc
ctcaccggcgaactgctgcgcgcccgcgacagcgtcaccgaggtcctgctgcccgcgtcg
ctgaccacgtcccagctgctgcgcctggccgccgacccggacggcttcgcccaggaactg
gtccgccccatgccccgaccgccgcaacccgccgcgcgccgcggcacccgcttccacgcc
tgggtcgagagccgcttcgaagaactgacactgcccatgctcgaacccgacgagcttccc
ggcagcgaagccgagatcgccgacgaacacgacctcgcggccctcaaggacgccttcgaa
cgcaccgagtacgcccgccgcacgccctaccgcgtggaggctcccttccagctggcgatc
gccggccgcgtcgtacgcggccgcatcgacgccgtctaccggcaggccaccggagagaag
gccgccggaggggagggagacgccggcgacgggacgacgtacgagatcgtcgactggaag
acccaccgcaaccgcaccgccgaccccctccagctcgccgtctaccggatcgcctgggcc
gagcagcagggcgtccccctggggtcggtcaccgccgccttcctgtacgtacgcaccggc
gaggtcgtacgccccgacgcgctgccggaccgcgaggcgctggagcggctgctgctggag
gaaccgtccggtgagataccgcactccgaggacacctccgcgggccgatag
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