Streptomyces cathayae: PYS65_15620
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Entry
PYS65_15620 CDS
T09946
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
scay
Streptomyces cathayae
Brite
KEGG Orthology (KO) [BR:
scay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scay03016
]
PYS65_15620
Enzymes [BR:
scay01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
PYS65_15620
Transfer RNA biogenesis [BR:
scay03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PYS65_15620
Prokaryotic type
tRNA splicing ligases
PYS65_15620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WGD41474
UniProt:
A0ABY8K1S7
LinkDB
All DBs
Position
complement(3452304..3453497)
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AA seq
397 aa
AA seq
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MSYVEIPGAKVPIRLWTDPATVEEGALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVRTSLTADDLPGDLSRLRSRIEQMIPVGRGMHDSPVDPA
RLHGFTTGGWDDFWGRFDGVAEAVRFRQERATKQMGTLGSGNHFVEVCTDTTGAVWLMLH
SGSRNIGKELAEHHIGVAQKLPHNQGLVDRDLAVFVADTPQMAAYRNDLFWAQEYAKRNR
SIMMALLKDVIRKEFKKAKPAFEAEISAHHNYVAEERYDGMDLLVTRKGAIRAGSGEFGI
IPGSMGTGSYIVKGLGNADSFNSASHGAGRRMSRNAAKRRFSTKDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagataccgggtgcgaaggtgccgatccgtctgtggacggacccggcg
acggtggaggagggcgccctccagcagttgcggaacgtggcgaccctgccctggatcaag
ggcctcgccgtgatgccggacgtgcactacgggaagggcgcgacggtcggctcggtcatc
gcgatgcggggcgcggtgtgtcctgcggcggtcggggtcgacatcggctgcggcatgtcg
gcggtgcggacgtccctgacggccgacgacctgccgggcgacctgtcccggctgcgctcg
aggatcgagcagatgatcccggtcgggcgcgggatgcacgattcccccgtggacccggcc
cggctgcacggcttcacgaccggcggctgggacgacttctgggggcgcttcgacggcgtg
gcggaagcggtcaggttccgtcaggagcgggccacgaagcagatgggaacgcttggctcg
ggcaaccacttcgtcgaggtctgcacggacacgaccggtgcggtctggctgatgctgcac
tccggttcccggaacatcggcaaggaactggccgagcaccacatcggggtggcgcagaag
ctcccgcacaaccagggcctggtcgaccgtgaccttgccgtcttcgtggcggacaccccg
cagatggcggcctaccggaacgacctgttctgggcgcaggagtacgcgaagcgaaaccgt
tcgatcatgatggcgttgctgaaggacgtgatccgcaaggagttcaagaaggcgaagccg
gccttcgaggcggagatcagcgcgcaccacaactacgtggccgaggagcgctacgacggc
atggacctgctcgtcacccgcaagggggcgatccgcgcgggctccggcgagttcgggatc
atcccgggctccatgggcacgggctcgtacatcgtcaagggcctcgggaacgccgattcg
ttcaactcggcgtcgcacggcgccggccggcgcatgagccgcaacgcggcgaagcggcgc
ttctcgacgaaggacctggaggagcagacacggggcgtggagtgccgcaaggactccggt
gtcgtggacgagatcccgggcgcgtacaagccgatcgagcaggtcatcgaccagcagcgg
gacctcgtggaggtcgtggcgaagctgaagcaggtcgtctgtgtgaagggctga
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