Streptomyces cathayae: PYS65_16255
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Entry
PYS65_16255 CDS
T09946
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scay
Streptomyces cathayae
Brite
KEGG Orthology (KO) [BR:
scay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scay03032
]
PYS65_16255 (topA)
03400 DNA repair and recombination proteins [BR:
scay03400
]
PYS65_16255 (topA)
Enzymes [BR:
scay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PYS65_16255 (topA)
DNA replication proteins [BR:
scay03032
]
Prokaryotic type
DNA Topoisomerases
PYS65_16255 (topA)
DNA repair and recombination proteins [BR:
scay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PYS65_16255 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
WGD41587
LinkDB
All DBs
Position
complement(3590808..3593726)
Genome browser
AA seq
972 aa
AA seq
DB search
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFQPIYVVNADKRAQVKKLKDLLKESDELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKDAIREAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFSPTSGFAPAGGPPSGRAGDASD
PASLVARLQSVDGRRVAQGRDFDSLGRLKSANTLQLDEANARALAAALENTRFSVRSVES
KPYRRSPYAPFRTTTLQQEASRKLGYGAKATMQIAQKLYENGYITYMRTDSTTLSETAVA
AARAQVTQLYGADYLPPQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYE
LIWKRTVASQMKDATGNSVTVKIGGTASDGRDVEFTASGKTITFHGFLKAYVEGADDPNA
ELDDRERRLPQVAEGDALTAEKISVDGHATKPPARYTEASLVKELEEREIGRPSTYASII
GTILDRGYVFKKGTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQSV
PWLKRFYFGETVPDSGFAAGGTGTDNGGAAEAGNGDGDHLGGLKELVTDLGAIDAREVSS
FPVGDGIVLRVGRYGPYVERGEKDAEGHQRADVPEDLAPDELTVELAEELLAKPSGDFEL
GTDPATGRPIVAKDGRYGPYVTEILPEGTPKTGKNAVKPRTASLFKSMSLDTVTLDDALK
LMSLPRVVGADAEGVEITAQNGRYGPYLKKGTDSRSLQSEEQLFTITLEEALAIYAQPKQ
RGRAAAKPPLKELGEDPVSGKPVVVKDGRFGPYVTDGETNATLRSGDSVETITRERGFEL
LAEKRAKGPAKKTAAKKTPAKKTAAKKAPAKKTAAAKKTAAKSTTAKTTTAKKTTATKAA
AKKATAVNGAED
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcgaagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccctggctacatcgtcgaggcgagcgtc
gggcatattcgcgaccttcccaacggcgccgcggaggtgcccgagaagtacaccggtgag
gtccgccgtctcggtgtggacgtcgaacacgacttccagccgatctatgtggtcaacgcc
gacaaaagggcccaggtcaagaagctcaaggacctgctgaaggagtccgacgagctcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggaagtcctc
aagccgaagatcccggtcaagcggatggtcttccacgagatcaccaaggacgcgatccgc
gaggccgtggccaacccgcgccagctcaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccccggctgtccgccggccgtgtccagtccgtcgccacccggctggtggtcgagcgggaa
cgcgagcgcatcgccttccgttccgccgagtactgggacctgacgggcaccttttccccc
acctccggcttcgctccggcggggggacccccatccggccgcgcgggggacgcctccgat
ccggcgtcgctggtcgcccgtctccagagcgtcgacggcaggcgcgtcgctcagggccgc
gacttcgactccctgggccggctcaagagcgcgaacaccctccagctcgacgaggcgaac
gcccgcgccctggccgccgccctggagaacacgcggttctccgtgcggtccgtcgagtcc
aagccgtaccgccgctcgccgtacgccccgttccgtacgacgacactgcagcaggaggcg
agccgcaagctcggctacggcgcgaaggccaccatgcagatcgcgcagaagctgtacgag
aacggctacatcacctacatgcgtacggactcgacgacgctgagcgagacggcggtcgcc
gccgcccgcgcccaggtcacgcagctgtacggcgccgactacctgccgccgcagccgcgc
acctacgccgggaaggtgaagaacgcccaggaggcgcacgaggcgatccgcccctccggc
gaccgtttccgcaccccggccgagaccggcctgaccggcgaccagttccggctctacgag
ctgatctggaagcggaccgtcgcctcccagatgaaggacgccaccggtaactccgtcacc
gtgaagatcggcggcaccgcgtccgacggccgggacgtcgagttcaccgcgtccggcaag
accatcaccttccacggcttcctgaaggcgtacgtcgagggcgcggacgacccgaacgcc
gagctcgacgaccgcgagcgccggctgccgcaggtcgccgagggcgacgccctgaccgcc
gagaagatctcggtcgacggccacgccaccaagccgccggcccgctacaccgaggcgtcg
ctggtcaaggagctggaggagcgggagatcggccgcccgtcgacgtacgcgtcgatcatc
ggcacgatcctcgaccgcggctatgtgttcaagaagggcacggccctggtgccgtccttc
ctctccttcgccgtggtcaacctgctggagaagcacttcggccggctcgtcgactacgac
ttcaccgccaagatggaggacgacctcgaccgcatcgcacgcggtgaggcgcagtccgtg
ccgtggctgaagcggttctacttcggcgagaccgtgcccgacagcggcttcgccgcgggc
ggcaccggcaccgacaacggtggcgcggccgaggcgggcaacggcgacggggaccacctc
ggcggcctcaaggaactggtgaccgacctgggcgcgatcgacgcccgcgaggtgtcgtcg
ttcccggtgggcgacggcatcgtgctgcgggtcgggcgctacggcccgtacgtcgagcgc
ggtgagaaggacgcggagggtcaccagcgggccgacgtccccgaggacctggcgcccgac
gagctgaccgtcgaactggccgaggaactgctcgccaagccgagcggcgacttcgagctg
ggcaccgacccggcgaccggccgcccgatcgtcgccaaggacggccgctacgggccgtac
gtcacggagatcctccccgagggcacgccgaagaccggcaagaacgcggtcaagccgcgc
accgcctccctcttcaagtcgatgtccctggacacggtgacgctcgacgacgcgctgaag
ctgatgtcgctgccgcgcgtggtcggcgccgacgccgagggcgtggagatcaccgcgcag
aacggccgctacgggccgtatctgaagaagggcaccgactcgcggtcgctgcagtccgag
gagcagctcttcacgatcacgctggaggaggcgctggcgatctacgcccagcccaagcag
cgtggccgggccgcggccaagccgccgctgaaggagctgggtgaggacccggtcagcggg
aagccggtcgtggtgaaggacggccgcttcggtccgtacgtcaccgacggcgagaccaac
gcgaccctgcgctccggtgacagcgtcgagacgatcacccgggagcgcggcttcgagctg
ctggccgagaagcgcgccaaggggcccgccaagaagacggccgccaagaagaccccggcc
aagaagacggccgccaagaaggccccggcgaagaagacggcggcggcgaagaagaccgcg
gcgaagtccacgacagcgaagaccacgacggcgaagaagacgacggcgaccaaggccgcc
gcgaagaaggcgacggccgtgaacggcgccgaggactga
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