Streptomyces cathayae: PYS65_20110
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Entry
PYS65_20110 CDS
T09946
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
scay
Streptomyces cathayae
Pathway
scay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scay00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PYS65_20110
09124 Replication and repair
03420 Nucleotide excision repair
PYS65_20110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scay03021
]
PYS65_20110
03400 DNA repair and recombination proteins [BR:
scay03400
]
PYS65_20110
Enzymes [BR:
scay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYS65_20110
Transcription machinery [BR:
scay03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PYS65_20110
DNA repair and recombination proteins [BR:
scay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PYS65_20110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
IMD
ETAA1
Motif
Other DBs
NCBI-ProteinID:
WGD42257
LinkDB
All DBs
Position
complement(4384372..4386015)
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQADDCRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVQYSRYPVPHALLVDIAETMDRYGRLSLLKHPAHGLVLTSTDRPVLEEVLR
SKRIAPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHSIELVEDGWT
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAASMAQAKSTTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLILYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERIAYATAETEEKYRFCATTATKRKVTEAIVRRFAGQQILVIGQYIDQ
LDELGEHLDAPVIKGETSNAQREKLFEAFRQGEIGVLVVSKVANFSVDLPEATVAVQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIMDA
DELLAES
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggtccgctcatcgtccagtccgacaagacgcttctcctggaagtcgaccacgag
caggcggacgactgccgtcgcgccatcgcgcccttcgccgaactggagcgggccccggag
cacatccacacctaccgggtgaccccgctcggcctgtggaacgcgcgggccgccggccac
gacgccgagcaggtggtggacgcgctggtgcagtacagccgctacccggtgccgcacgcg
ctgctcgtcgacatcgccgagacgatggaccgctacggccggctcagcctgctcaagcac
ccggcgcacggtctcgtcctcaccagcaccgaccggcccgtcctggaggaggtgctgcgc
tccaagcggatcgccccgctggtcggcgcccgcatcgacccggacaccgtcgccgtgcac
ccctcggagcgcgggcagatcaagcagacgctgctgaagctgggctggcccgccgaggac
ctcgccgggtacgtggacggcgaggcgcactccatcgagctggtcgaggacgggtggaca
ctgcgcccgtaccagaagcaggccgtggagaacttctggcacggcggctccggcgtggtc
gtcctcccctgcggcgcgggcaagacgctggtcggcgccgcttcgatggcacaggcgaag
tcgaccacgctgatcctggtcaccaacaccgtctcggcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcgggacgaagaaggag
atccgtcccgtcaccatcgccacctaccaggtgctgacgacccgtcgcaagggcgtctac
ccccacctggaactcttcgactcccgggactggggcctgatcctctacgacgaggtgcac
ctgctgcccgcccccgtcttcaagttcaccgccgatctgcaggcccgccgtcggctcggt
ctgacggcgaccctcgtccgcgaggacggccgcgagtcggacgtgttctccctcatcggc
ccgaagcggttcgacgcgccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtggaggtccgggtcaacctcaccgactccgaacggatcgcgtacgcgacggcg
gagaccgaggagaagtaccgcttctgcgcgacgaccgccaccaagcggaaggtgacggag
gcgatcgtgcgccgcttcgccggtcagcagatcctcgtcatcgggcagtacatcgaccag
ctggacgagctgggcgagcacctggacgcccccgtgatcaagggcgagacgtcgaacgcg
cagcgggagaagctgttcgaggcgttccggcagggcgagatcggcgtgctggtcgtctcc
aaggtcgcgaacttctcggtcgacctgccggaggccacggtcgccgtccaggtgtcgggc
accttcgggtcccggcaggaggaggcccagcggctgggccgggtgctgcggcccaaggcg
gacggccaccaggcccacttctactccgtggtcgcccgcgacaccatcgaccaggacttc
gcggcccaccgccagcgcttcctggcggaacagggctacgcctaccgcatcatggacgcg
gacgaactcctcgcggagagctga
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