Streptomyces cathayae: PYS65_27405
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Entry
PYS65_27405 CDS
T09946
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scay
Streptomyces cathayae
Pathway
scay03030
DNA replication
scay03410
Base excision repair
scay03420
Nucleotide excision repair
scay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYS65_27405 (polA)
03410 Base excision repair
PYS65_27405 (polA)
03420 Nucleotide excision repair
PYS65_27405 (polA)
03440 Homologous recombination
PYS65_27405 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scay03032
]
PYS65_27405 (polA)
03400 DNA repair and recombination proteins [BR:
scay03400
]
PYS65_27405 (polA)
Enzymes [BR:
scay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYS65_27405 (polA)
DNA replication proteins [BR:
scay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PYS65_27405 (polA)
DNA repair and recombination proteins [BR:
scay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PYS65_27405 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYS65_27405 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WGD43560
LinkDB
All DBs
Position
6011928..6014654
Genome browser
AA seq
908 aa
AA seq
DB search
MAETAAKKTDQTSGEARPRLMLMDGHSLAYRAFFALPVENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSAEFPEYKANRSKTPDEFKGQVELIGELLDAMSAPRF
AVEGFEADDVIATLATRAEAEGFDVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVVEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFADLVERVDEVKG
KVGQNLRDHLESVKLNRRLTELERQVELGRDVTDLERTAYDRKAVAMILDTLEIRNPSLR
ERLFAVDPGAQEPEAAPVVADGVELDGTVLGAGELAGWLAEHGTAPLGVATVDTWALGAG
SVAEVALAAAAGPAAWFDPAELDEGDERAFAAWLADAERSKVFHNAKGAMRVFAEHGWSI
RGVSMDTALAAYLVKPGRRSFDLDALSLEYLHRELEPAAAADGQLAFGADDTAEAEALMV
QARAVLDLGEAFEDRLTEVGAADLLRDVELPTSVLLARMERHGIAADRTHFEGMEQMFAG
AVQQAVQEAHAAAGHEFNLGSPKQLQEVLFGELGLPKTKKTKTGYTTDADALAWLAGRTD
NELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDAGLIEAFTSGEDLHTTAAAQV
FAVEQSAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARALMDAYFERFGGVRDY
LRRVVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
NVDRALREADLTSRMLLQVHDEIVLEIAPGERPAAEELIRREMAAAVRLRVPLGVSIGAG
PDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagcagcgaagaagaccgaccagacctccggcgaggcccgtccgcgactg
atgctcatggacgggcactcgctggcctaccgcgcgttcttcgcgctgcccgtggagaac
ttcacgaccgcgacgggccagccgacgaacgcgatctacggtttcgcgtcgatgctggcg
aacacgctgcgcgacgaggcgcccacccacttcgcggtggccttcgacgtctcccgcaag
acctggcggtcggcggagttccccgagtacaaggcgaaccgctccaagacaccggacgag
ttcaagggacaggtcgagctgatcggtgagctgctcgacgcgatgagcgccccgcgcttc
gccgtcgagggcttcgaggcggacgacgtcatcgccacgctcgccacccgggccgaggcc
gagggcttcgacgtgctgatcgtcaccggcgaccgggactccttccagctggtctccgag
cacaccacggtgctgtacccgaccaagggtgtctccgagctgacccggttcaccccggag
aaggtggtcgagaagtacgggctgacgcccgcgcagtacccggacttcgcggcgctgcgc
ggcgacccgtccgacaacctgcccggcattcccggcgtcggtgagaagacggcggcgaag
tggatcaaccagttcggttccttcgcggacctcgtcgagcgggtcgacgaggtcaagggc
aaggtcgggcagaatctgcgcgaccacctggagtcggtcaagctcaaccgccgcctcacc
gagctggagcggcaggtcgagctgggcagggacgtcaccgacctggagcggaccgcctac
gaccgcaaggccgtcgcgatgatcctggacaccctggagatcaggaacccgtcgctgcgc
gagcggctcttcgccgtcgaccccggtgcgcaggagcccgaggcggccccggtcgtcgcg
gacggggtggagctggacggcaccgtcctgggcgcgggcgagctggccggctggctcgcc
gagcacggcaccgcgcccctcggcgtcgccacggtcgacacctgggcgctgggggccggc
tcggtcgccgaggtcgccctggcggcggccgcggggccggccgcctggttcgacccggcc
gagctggacgagggcgacgagcgggcgttcgccgcatggctcgccgacgcggagcggtcc
aaggtgttccacaacgccaagggcgcgatgcgggtcttcgccgagcacggctggagcatc
cggggcgtctccatggacaccgcgctcgccgcctacctggtcaagccgggccgccgctcc
ttcgacctggacgcgctgtccctggagtacctgcaccgcgagctggagcccgccgccgcg
gccgacggccagctggccttcggcgcggacgacaccgccgaggccgaggcgctgatggtg
caggcccgcgcggtcctcgacctgggcgaagccttcgaggaccgtctgacggaggtgggc
gccgcggatctgctgcgggacgtggagctgccgacgtccgtcctgctggcccgcatggag
cggcacggcatcgcggcggaccggacccacttcgagggcatggagcagatgttcgcgggc
gccgtgcagcaggccgtgcaggaagcgcacgcggcggcgggacacgagttcaacctgggc
tcgcccaagcagctccaggaggtcctcttcggtgaactcggcctgccgaagacgaagaag
accaagaccgggtacaccaccgacgccgacgccctggcctggctggcgggccggaccgac
aacgaactgccggtgatcatgctccggcaccgtgagcaggcgaagctgcgcgtcaccgtc
gaggggctgatcaagaccatcgccgcggacggccgcatccacaccacgttcaaccagacg
gtcgccgccaccggccgcctgtcgtcgaccgacccgaacctgcagaacatcccggtccgt
accgacgagggccgcgcgatccgtcgcgggttcgtcgtcggggaaggcttcgagtcgctg
atgacggcggactacagccagatcgaactgcgggtgatggcgcacctctccgaggacgcc
ggactcatcgaggcgttcacctccggcgaggacctgcacaccaccgccgccgcgcaggtg
ttcgcggtcgagcagtccgcggtcgacgcggagatgcgccgcaagatcaaggcgatgtcg
tacggcctcgcgtacgggctgtccgccttcggcctctcccagcagctgaacatcgaggcg
gccgaggcccgcgccctgatggacgcgtacttcgagcggttcggcggggtgcgggactac
ctgcgccgcgtggtcgacgaggctcgggcgacgggttacacggcgaccctcttcggccgc
cggcgctacctgcccgacctcaacagcgacaaccgccagcgccgcgaggcggccgagcgg
atggcgctgaacgcgccgatccagggcacggcggcggacatcgtcaagatcgccatgctg
aacgtggaccgggcgctgcgcgaggcggacctcacgtcccggatgctcctccaggtccac
gacgaaatcgtcctggagatcgcccccggcgagcgcccggccgcggaagagctgatccgc
cgggagatggccgccgcggtccggctccgcgtccccctgggtgtctcgatcggcgcgggc
ccggactgggagtcggcggcgcactag
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