Sellimonas catena: ACI3DN_01920
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Entry
ACI3DN_01920 CDS
T10804
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scaz Sellimonas catena
Pathway
scaz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACI3DN_01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scaz03021
]
ACI3DN_01920
03400 DNA repair and recombination proteins [BR:
scaz03400
]
ACI3DN_01920
Enzymes [BR:
scaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACI3DN_01920
Transcription machinery [BR:
scaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACI3DN_01920
DNA repair and recombination proteins [BR:
scaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACI3DN_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
DUF4332
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XKQ72081
LinkDB
All DBs
Position
complement(373531..374490)
Genome browser
AA seq
319 aa
AA seq
DB search
MFDFNKPNIEITEMSEDKRYGRFVVEPLERGYGTTLGNSLRRIMLSSLPGAAISQVKIDG
VLHEFSSIPGVKEDVTEIIMNLKTLAIKNTSETDEPKTAYIEFEGEGVVTGADIQVDSDI
EIMNPDVVIATLNGGADSKLYMELTITKGRGYVSSDKNKKEDLPIGVIPIDSIYTPVERV
NLTVQNTRVGQITDYDKLTLDVYTNGTLLPDEAVSLAAKVLNEHLKLFIDLSEVAQAAEV
MIEKEDDEKEKVLEMSIDELELSVRSYNCLKRAGINTVEELTNRTPEDMMKVRNLGRKSL
EEVLAKLKELGLELSQGEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgattttaataaaccgaatatcgaaatcacagaaatgtcagaagataaaagatac
ggcagatttgttgtggagccgctggaaagaggctacggaacaacactcggaaacagtctg
agaagaattatgctgtcctctctgcctggagctgcaattagccaggtaaagatcgatggt
gtacttcatgaattcagttccattccgggagtgaaggaagacgttactgagattatcatg
aatctgaagacattggcgattaaaaacacttcagaaacagacgaaccaaaaacagcttat
atcgaatttgaaggagaaggcgttgtaacaggcgctgatattcaggtggattctgatatt
gaaatcatgaatccggatgttgtcattgctacactgaacggtggagcagacagcaagctt
tacatggagctgaccatcacaaaaggaagaggttatgtaagctcggataagaacaagaag
gaagatcttccgatcggcgtgatcccgattgattctatctacactcctgtagagcgtgta
aatctgactgtacagaatactcgtgtcggacagattacagactacgataagctgacgctg
gatgtatatacaaacggtaccctgcttccggatgaggcagtcagccttgcggcaaaagtg
ttaaacgaacatctgaagctctttattgatctctccgaagtggctcaggctgctgaagtg
atgatcgaaaaagaagatgatgagaaagaaaaagttcttgagatgagtatcgatgagctg
gaactttctgttcgttcttacaactgcctgaagagagctggaatcaataccgtggaagag
ctgacaaacagaactcctgaggatatgatgaaagtacgtaatctgggacgtaagtcttta
gaagaagtgttagcaaaattgaaagaactcggcctcgaactcagccagggagaggaatag
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