Sellimonas catena: ACI3DN_05900
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Entry
ACI3DN_05900 CDS
T10804
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
scaz Sellimonas catena
Pathway
scaz03030
DNA replication
scaz03430
Mismatch repair
scaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACI3DN_05900 (holB)
03430 Mismatch repair
ACI3DN_05900 (holB)
03440 Homologous recombination
ACI3DN_05900 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaz03032
]
ACI3DN_05900 (holB)
03400 DNA repair and recombination proteins [BR:
scaz03400
]
ACI3DN_05900 (holB)
Enzymes [BR:
scaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACI3DN_05900 (holB)
DNA replication proteins [BR:
scaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACI3DN_05900 (holB)
DNA repair and recombination proteins [BR:
scaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACI3DN_05900 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DAP3
NACHT
AAA
AAA_22
Sigma54_activat
iSTAND
Motif
Other DBs
NCBI-ProteinID:
XKQ72806
LinkDB
All DBs
Position
1149082..1150071
Genome browser
AA seq
329 aa
AA seq
DB search
MTGFKDVVGRKDLVSYIQKAITQNQISHAYILNGERGSGKKMFAQLFAMTLQCERGGAEP
CNECHSCRQALSGNHPDIIRVVHEKPNTISVDEVRVQINNDIMIRPYNGKYKIYIVPDAD
MMTPQAQNALLKTIEEPPEYAVIFLLTENADSLLPTILSRCVILKIKNVKDALIKKYLME
QMEIPDYKADVCTAFAQGNMGRAIMLATSEHFNEIKEETLQMMKYIKDMELPELLKALKS
LSSYKIEVDDILDLISVWYRDVLLYKATKDINGVIFSDQMKYIKERANTSSYEGIETILK
ALETAKTRLKANVNFDLVMELLLLTIKEN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgggatttaaagatgttgtcgggcgtaaggatttagtatcttatattcagaaagct
attacgcagaaccagatttcccacgcctatattttaaatggagagcgcggatcaggaaaa
aagatgtttgcacagctgtttgcgatgacgcttcaatgtgaacggggcggagcagagccg
tgtaatgagtgtcattcctgccgtcaggctctatctggaaatcatccggatattatcagg
gtggttcacgaaaagccgaatacgatcagcgtggatgaggtacgtgtacagattaataat
gatattatgatccggccttacaatggaaaatataagatctatattgtgccggatgcggac
atgatgacgcctcaggcacagaatgcgttgttgaaaaccatagaggagccgccggaatat
gcggtgatttttcttcttacagaaaatgcggacagccttctgcctacgatcttatcacgg
tgtgttattttaaagatcaagaatgtaaaggatgcgctgataaaaaaatatctgatggag
cagatggagataccggattataaggcggacgtctgcactgcttttgctcagggaaatatg
ggaagagcgatcatgctcgcgacctcagagcattttaatgagatcaaagaagagacgctc
cagatgatgaaatacatcaaggacatggagcttccggagcttttgaaggcgctgaaaagc
ctctcctcgtacaagatagaggtagatgatatcctggatctgatcagtgtatggtatcgg
gacgttctgctttacaaggcgacgaaagatatcaacggagtgatattctcagatcagatg
aagtacatcaaagagagggcaaatacaagctcctatgaagggatcgagacgattctcaag
gcacttgagacagccaagacaagactgaaagcaaatgtaaatttcgatctggtgatggag
cttctgctactgactataaaggagaactaa
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