Sellimonas catena: ACI3DN_08155
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Entry
ACI3DN_08155 CDS
T10804
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scaz Sellimonas catena
Pathway
scaz03030
DNA replication
scaz03430
Mismatch repair
scaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACI3DN_08155
03430 Mismatch repair
ACI3DN_08155
03440 Homologous recombination
ACI3DN_08155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaz03032
]
ACI3DN_08155
03400 DNA repair and recombination proteins [BR:
scaz03400
]
ACI3DN_08155
Enzymes [BR:
scaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACI3DN_08155
DNA replication proteins [BR:
scaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACI3DN_08155
DNA repair and recombination proteins [BR:
scaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACI3DN_08155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
TssR_C
B1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XKQ73211
LinkDB
All DBs
Position
1628038..1631502
Genome browser
AA seq
1154 aa
AA seq
DB search
MSFVHLHVHTEYSLLDGSNKIKEYVARVKELGMNSAAITDHGVMYGVIDFYKEAKKAGIN
PILGCEVYVAPGSRFDREAGHNDDRYYHLVLLAENDEGYHNLMKIVSRGFTEGYYYKPRV
DKELLRQYSGGIIALSACLAGEVQKNLVRGLYEEAKKAAYEYQDIFGKGNFFLELQDHGM
GEQQTANQGLLRLSEETGIELVATNDVHYTYAEDEKPHDILLCLQTGKKLSDENRMRYEG
GQYYVKSEEEMRGLFPYALQALENTQKIADRCHVEIEFGVTKLPKYDVPDGYTSWEYLQK
LCFDGLEDRYPGSPKELVERLNYELDTIRTMGYVDYFLIVWDFIKYARDHDIMVGPGRGS
AAGSIVSYCLGITNIDPIRYNLLFERFLNPERVTMPDIDVDFCFERRQEVIDYVTRKYGT
DRVVQIVTFGTLAARGVIRDVGRVMDLPYAFVDSIAKMIPTELNMTLDRALTMNPELKKL
YDTDEQVRELIDMSRRLEGLPRHTSMHAAGVVISQKSIDEYVPLSLGSDNSPVTQFTMTT
LEELGLLKMDFLGLRTLTVIQNAARLARQSTGKKIDMSRIDYDDKAVFDSLCSGKTDGVF
QLESAGMKSFMKELKPRNLEDVIAGISLYRPGPMDFIPQYVKGKNHPEQITYDCPQLKPI
LEPTYGCIVYQEQVMQIVRDLAGYTLGRSDILRRAMSKKKGDVMERERQNFVYGNPEENV
PGCVANGIDEKTANKIYDEMIDFAKYAFNKSHAAAYAVVSYETAWLKYYYPVEFMAALMT
SVIDNPGKVAEYIYTCKEMGIKLLPPDINKGYGNFSVDGGDIRYGLAAIKSIGRSVIDDI
IREREAGGEFKNLRDFAERMSGKDINKRTVENFIKAGAFDCFTGTRKQHMMVYLKILDQI
NQEKKYSMAGQMSLFDIVDEDQRKEFDIQFPDVGEYEKETMLAFEKEVLGVYVSGHPLEE
YEDRWKKAITATTHDFQYDDETGHTKVRDGAKETIGGMITSRTIKYTKTNKVMAFITIED
LLGTVEVVIFPRDYEKNQQYLEVDRKVFVRGRVSEEDESASKLICETIIPFEQTEKQLWI
QYPDKASFLQEEQLVYSMLHMSEGEEKVFIYCQAERAVKQLPAGRNVDISDELMSRLTNY
FGKERVKVVEKSKI
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtacatttgcatgttcatacagaatatagtttgttagacggttccaacaag
atcaaggagtatgtcgcccgtgtgaaggaactcggcatgaacagtgccgccattacggac
cacggtgtgatgtacggtgtgatcgatttttataaagaagcaaagaaggcggggatcaat
ccgatccttggatgtgaggtatatgtggctccgggttcccggtttgaccgtgaggcaggg
cacaatgatgaccggtattaccaccttgtccttctggcggaaaatgatgagggataccac
aacctgatgaagattgtatcgagagggtttacggaagggtattactacaagccgcgtgtg
gataaagagcttttgaggcagtacagcggcgggatcatcgctctgagtgcctgtctggcc
ggagaggtgcagaagaatctggtgaggggtctttatgaagaggccaagaaagccgcatac
gagtatcaggatattttcggaaaagggaactttttcctggagctgcaggatcacgggatg
ggcgagcagcagacggccaaccagggtcttcttcgtctgtcggaagagacgggaattgag
ctggtagctaccaatgacgtccactatacctatgcggaggatgaaaagccgcatgacatc
ctgctttgtcttcagacgggaaagaagctttctgatgagaaccggatgcgttacgaaggc
ggccagtattatgtaaagagtgaagaggagatgcgggggctcttcccgtatgccctgcag
gcacttgagaatacgcagaaaatcgcagaccgctgccatgtggagattgaattcggagtc
accaagcttccgaaatacgatgtgccggatggctatacatcatgggaatatttgcagaag
ctctgctttgacgggctggaggaccggtatccgggaagccccaaggaactggtggagcgg
ctgaattatgagctggatacaatccgcacgatggggtatgtggactacttcctgattgtg
tgggatttcatcaaatatgcacgggatcatgacattatggtgggaccgggacgaggttcc
gcggcgggaagtatcgtgtcctactgtcttggaattaccaacattgatccgatccggtat
aacctgctctttgagcggttcctgaatccggagcgtgtcaccatgccggatatcgacgtg
gacttctgcttcgagagaaggcaggaggttatcgattatgtaacgagaaaatacggaaca
gaccgtgtggtacagattgttaccttcggtaccctggcggcgcggggagttatccgggat
gtggggcgtgtcatggatcttccgtacgcctttgtggacagcattgcaaagatgattccg
accgagctgaatatgacgcttgaccgggcgcttacgatgaatccggagctgaaaaagctg
tatgatacggatgagcaggtaagagaactgattgacatgagcaggcgtctggaaggtctt
ccgagacatacgtccatgcacgcggcgggggttgtcatcagtcagaagtccatcgatgaa
tatgtgccgctctcccttggatcggacaattctccggtgacccagtttaccatgacgacg
ctggaagagctcggacttctgaagatggactttcttgggcttcggacccttaccgtcatt
cagaatgcggccaggcttgcccggcaaagcaccggaaagaagatcgacatgtccaggatc
gactatgatgacaaggcagtcttcgattccctttgcagcggaaagacggacggcgtgttc
cagctggaaagcgcagggatgaagagcttcatgaaggaattaaagccgcggaatctggag
gacgtcattgcggggatttctctgtaccgtccgggaccgatggactttattccgcagtat
gtcaaaggaaagaatcatccggaacagatcacctatgactgtccgcagttaaaaccgatt
ctggaaccgacctacggatgtatcgtctatcaggagcaggttatgcagatcgtgcgggat
ctggcgggatacacgctggggcgaagcgacattctgcggcgtgccatgtcaaagaaaaag
ggcgatgtcatggagcgggagcgccagaatttcgtctacggcaatccggaggaaaacgtg
ccgggatgcgtggcaaacggcatcgatgagaaaacggccaacaagatttacgacgagatg
attgattttgcgaaatatgccttcaacaagtctcacgcggcggcctatgcggtcgtttcc
tacgagacggcatggctgaaatattattatccggtagaatttatggcggcgctgatgact
tcggtcatcgataatccggggaaagtggcggaatacatttatacctgtaaggagatgggc
ataaaactgctgcctccggacatcaataaagggtacggcaacttttccgtggacgggggc
gatatccgttacggccttgcggcaatcaaaagtatcggacggtccgtgatcgatgacatt
atccgggaaagagaggccgggggagagttcaaaaacctccgggatttcgcggagcggatg
tccggcaaggacatcaacaaaaggacggttgaaaactttattaaagccggggccttcgac
tgttttaccgggacgagaaagcagcacatgatggtctatcttaagatccttgaccagatc
aatcaggagaagaaatattccatggcaggacagatgagcctgtttgatattgtggatgag
gatcagagaaaggaatttgatattcagttcccggatgtgggcgaatacgaaaaggagacg
atgcttgcctttgaaaaggaagtgctcggcgtctatgtcagcggtcatccgctggaggaa
tacgaggaccggtggaagaaagcgatcacggcgacgacacatgatttccagtatgacgat
gagaccggacatacgaaagtccgggacggggccaaagaaaccatcggcggtatgattacg
tcccgcaccataaaatatacgaagaccaacaaggtgatggcatttattaccatcgaggac
ctgcttggtacggtggaggtcgtgattttcccgagggattacgagaagaatcagcagtat
ctggaagtggaccggaaggtgttcgtaagaggccgggtgtcagaagaagacgaaagtgcc
agcaagttgatctgtgagacgatcattccgtttgagcagacagaaaaacagctctggatt
cagtatcccgataaggcatccttccttcaggaagagcagcttgtctactccatgctccac
atgagtgaaggggaggagaaagtcttcatttactgtcaggcagaacgggcagtcaaacag
cttccggcggggcggaatgtggatatctcagatgaactcatgagcagattgacgaactat
tttggcaaagagcgggtaaaagtagtagaaaagtcaaagatatag
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