Sellimonas catena: ACI3DN_12175
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Entry
ACI3DN_12175 CDS
T10804
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
scaz Sellimonas catena
Pathway
scaz03410
Base excision repair
scaz03430
Mismatch repair
scaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACI3DN_12175 (recJ)
03430 Mismatch repair
ACI3DN_12175 (recJ)
03440 Homologous recombination
ACI3DN_12175 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaz03400
]
ACI3DN_12175 (recJ)
DNA repair and recombination proteins [BR:
scaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACI3DN_12175 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACI3DN_12175 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACI3DN_12175 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
SicP-binding
Motif
Other DBs
NCBI-ProteinID:
XKQ70480
LinkDB
All DBs
Position
2471238..2473001
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AA seq
587 aa
AA seq
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MKNWVLLRKGGNFTELGKRFGIRPRTAALIRNRDIIGEEAFDRYLNGTIADLYDGMLMKD
MDKAVDLLKEKIVEKQSIRIIGDYDIDGVNATYILLEGLKGLGAEVDYDIPDRVRDGYGL
NIDLIDRALDDNIDTIVTCDNGIAAREEIAYGKSMGMAVVVTDHHEVPYEEYEDGTRGYL
IPPADAVVDIKREDCLYPFKGLCGAAVAYKLVEALYNAMGRDPEDVDYLMENVAIATVGD
VMDLTDENRIFVKQGLEMLKRTKNPGLAALMECTGVHTDRLSAYHIGFVIGPCINAGGRL
DTARRALELLCAKTKKEADLLAGDLKALNDSRKNLTEEAVKEAVVQVETTGLKEDKVLVV
YLPKCHESIAGIVAGRLRERYYKPVFVLTKAEEGAKGSGRSIETYHMYDELSRCKDLLTR
FGGHRLAAGLSLPEEKILSLRKKLNENTTMTEEDLTEKVVIDMQLPLCEITEDFVQELSL
LEPFGKGNTKPVFARRKLLFRRGRVIGKHQNVLKLEVEDADHTTMDAIFFGDLETFFSCL
SQKYGPDAKDHLLYGRGNPILMDVTYYPGINDYMGRRTLQITILDYR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactgggtactgcttagaaagggaggaaattttacagagctggggaaacggttt
gggatccggccgagaacagcggcgctgatccgcaaccgggatattatcggagaggaggct
tttgaccgttatctgaatggaaccatcgcggatctgtatgatggaatgcttatgaaagat
atggataaggcggtggatcttctgaaggaaaagattgtggagaaacagagtatccgcatt
atcggagattatgacattgacggagtcaatgctacatatattcttctggaggggttgaaa
ggactgggcgcagaagtggattatgacatcccggatcgtgtcagggacggatacgggtta
aatattgatctgattgaccgtgcgctggatgacaatattgatacaattgtgacatgtgac
aacggaatcgcagcgcgcgaagagatcgcgtatgggaaaagtatgggaatggctgtcgtt
gtaacagaccatcatgaagtgccgtatgaagaatacgaagacggtacacgcggctacctg
attccgcctgccgacgcggtggtggatatcaaaagagaggactgcctgtacccgttcaaa
ggactgtgtggagcagctgtggcctacaagctggtcgaggcactttacaatgccatggga
agagatccggaagatgtggattatctgatggaaaatgtagccatcgcgacggtaggagac
gttatggatctgaccgacgaaaaccggatttttgtaaaacaggggctggaaatgctgaag
agaacgaaaaatccgggacttgccgcgctgatggaatgtaccggagtccatacggaccgg
ctgtctgcctatcatatcggttttgtgatcggaccgtgcatcaatgccggggggcgtctg
gatacagccagacgggcactggagcttctgtgcgcaaagacaaaaaaagaagcggatctt
ctggcgggagatctgaaagctctcaatgacagccggaagaatctgacagaggaagcagtg
aaagaggccgtggtccaggtggagacaaccggattaaaggaggataaagtacttgtggtg
tatctgccaaaatgtcatgaaagcatagcgggaattgtggcaggacgtctgcgggagcgg
tactacaaaccggtgtttgtcctgacaaaggcagaagaaggagcaaaaggctccgggcgg
tcgattgaaacctaccatatgtacgatgagctgagcagatgcaaagatcttctgacacgt
ttcggcggacatcgtctggcagcggggctttcgctcccggaagaaaaaattctgtctctt
cggaaaaaactgaacgaaaatacgacaatgacggaagaagacctgacggagaaagttgtg
atcgacatgcagcttcctctgtgtgagattaccgaggattttgtgcaggaactttctctt
ctggagccgtttggaaaaggaaatacgaaaccggtgtttgcccggagaaagctgcttttt
cggcggggacgggttatcggaaagcatcaaaatgtgttgaaactggaagtagaagatgcg
gaccacaccactatggatgccatcttttttggtgatctggagaccttcttttcctgtctg
tcacaaaagtacggaccggatgcaaaagaccatcttttatatggaagaggaaatccgatt
ttgatggatgttacttactatccgggaatcaacgattacatgggaagaaggacgcttcag
attacaattctcgattatcggtaa
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