Sellimonas catena: ACI3DN_12365
Help
Entry
ACI3DN_12365 CDS
T10804
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
scaz Sellimonas catena
Pathway
scaz03030
DNA replication
scaz03430
Mismatch repair
scaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACI3DN_12365
03430 Mismatch repair
ACI3DN_12365
03440 Homologous recombination
ACI3DN_12365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaz03032
]
ACI3DN_12365
03400 DNA repair and recombination proteins [BR:
scaz03400
]
ACI3DN_12365
Enzymes [BR:
scaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACI3DN_12365
DNA replication proteins [BR:
scaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACI3DN_12365
DNA repair and recombination proteins [BR:
scaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACI3DN_12365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
DNA_pol3_a_NII
Rv2179c-like
tRNA_anti-codon
RNase_H_2
DEDDh_C
Auto_anti-p27
DZR
Motif
Other DBs
NCBI-ProteinID:
XKQ70514
LinkDB
All DBs
Position
2510732..2515231
Genome browser
AA seq
1499 aa
AA seq
DB search
MGKDFFEVFPTLNLSEETKFLLKDVRVTKVSTNSTRDFIRIYLFSTHLLQKKKIYELEYA
IKHQLFDRTMIQVEILESYQLSEQYTPENLMHEYYDSILLELEQRSAVERSMFEHADYDF
EDSVLNLKLQNSIVAEGKKEAIVSLLSEVFNDRFHVPLSIKVGYQPPKKKSALEFNELQL
QAEVDEIIERNEALRKEKRKNTEEADAGENGTKEEKTKSAPKTLKEKRFGKEMKKPFVRR
DFRKSDDPNMIYGRDFDDPPIELSQVLGEMGEITIRGKVISFDTREIRNEKTILMFAITD
FTDTIVVKMFARNDQLPDLLGDIKKGAFLKVKGITTIDKFDGELTIGSVSGIRKISDFTV
QRKDLYPEKRVELHCHTKMSDMDGVSEVKDIVKRAHDWGHKAIAITDHGVVQAFPDANHY
IESLDKDDPFKIIYGVEAYLVDDLTEIAQGAKDQTLQDTYVVFDLETTGFSPIQDKIIEI
GAVKVEHGAITERFSTFVNPKIPIPFKITDLTGITDDMVMDAEPVEEVLPKFLDFVGDAV
LVAHNAGFDVSFIEQNCRYQEIEKEFISVDTVALARVLLPTLSKYKLNVVAKALNISLEN
HHRAVDDAQATAEIFVRFVEMLKDREIFTLKELNHFGSMNPDAIRKLPSHHAVILAKNET
GRVNLYRLISMSHLQYFSRMPRIPKSEFLRYRDGLIIGSACEAGELFQAVLNGKSEEQIA
KLVNFYDYLEIQPIGNNRFMIASDRVSNVKSEEDLRDLNRKIVRLGEKFCKPVVATCDVH
FLDPEDEVYRRIIMAGKGFSDADEQAPLYLHTTEEMMEEFSYLGAAKAHEVVIENPNKIA
DMIEKIAPVRPDKCPPVIENSDQTLRDICYKKAHEMYGDPLPDVVTERLERELHSIISNG
FAVMYIIAQKLVWKSNEDGYLVGSRGSVGSSFVATMAGITEVNPLSPHYYCPHCHYSDFD
SEEVRAFAGGCGWDMKDKDCPVCGHPLVKDGFDIPFETFLGFKGNKEPDIDLNFSGDYQS
NAHKYTEVIFGKGQTFRAGTIGTLADKTAFGFVKNYYEERGSRKRNCEIDRIVQGCTGIR
RSTGQHPGGIIVLPHGEDINSFTPVQHPANDMNTDIITTHFDYHSIDHNLLKLDILGHDD
PTMIKTLEELINSDAMDNEYDGVENVFDARDIPLDDPKVMSLFANTEALGITPDDIDGCP
VGCLGIPEFGTDFVIQMVVDTKPKTLSDLIRISGLSHGTDVWLNNAQTLIQEGKATISTA
ICTRDDIMTYLINKGMDSELSFTIMEKVRKGKGLTPEFEESMKEAGVPDWYIWSCKKIKY
MFPKAHAAAYVMMAYRIAYCKVNYPLAYYAAYFGIRADAFSYELMCQGKEKLAYHIREYK
SRQDRLSKKEQDTMKDMKIVQEMYARGLEFMPIDIYEAKATKFRIVDGKLMPPLSSIDGM
GDKAAEAVEQAARDGRYLSKDDFRQRTKASKTVIDKMSELGLLSDLPESNQLSLFDFAD
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagacttttttgaagtgtttccgactctgaacctttcggaggagacaaaattt
ctgctgaaagatgtcagggttacgaaagtttcaacgaattcaacaagagattttatccgg
atttatctgttttccacccatcttctgcagaaaaagaagatttatgaactggaatatgct
atcaagcaccagttgtttgaccggacgatgatccaggtggagattctggagagctatcag
ctgtcagagcagtatacgccggaaaacctgatgcacgagtattatgacagtatccttctg
gagctggagcagagaagcgccgttgagagaagcatgtttgagcatgcggactatgatttc
gaggacagcgttctgaatctgaagcttcagaattctatcgtggcagaaggaaagaaggag
gcgattgtaagcctcctttccgaagtgtttaatgaccgttttcatgtgcctctttccatt
aaagtcggctatcaaccgccgaaaaaaaagagcgcgcttgagtttaacgaacttcagctt
caggcagaagtggatgaaattattgagagaaacgaggcactccgcaaggagaaacggaaa
aatacggaagaggcggatgccggagaaaacgggacaaaagaagagaaaacaaaatctgct
ccaaagacattgaaagaaaagcggtttggaaaagagatgaagaaaccgtttgtcagacgt
gatttcagaaaatcggatgatccgaacatgatttacggacgtgacttcgatgatcctccg
atcgaactctcccaggtgttgggtgagatgggcgagatcactatccggggaaaggtcatc
agctttgatacgagagagatccggaatgaaaagacgatcctcatgtttgccatcaccgat
tttacagatacgatcgttgtcaagatgtttgccagaaacgaccagctcccggacctgctt
ggcgacattaaaaagggtgcattcctgaaagtaaaggggattaccacgatcgacaaattt
gatggggagctgaccatcggttctgtgagcggaatccggaaaatcagtgacttcaccgtg
cagagaaaggatctctatccggaaaagcgtgtagagctgcactgtcatacgaaaatgagc
gatatggacggggtatcggaagtcaaagatattgtaaagcgtgcgcatgactggggacac
aaagcgattgccattacggaccacggtgtcgttcaggcattcccggatgccaaccactat
atcgaatctctggataaagacgatccgtttaaaattatttacggcgtggaggcgtatctg
gtggatgatctgacggagattgcccagggggcgaaggaccagactcttcaggatacatat
gtggtatttgacctggagacgaccggattcagcccgattcaggataagattatcgagatc
ggagcggtcaaggtggaacatggagcgatcacagaacgtttcagtactttcgtcaatccg
aagattccgattccgtttaagatcacggatctgaccggtattaccgatgacatggtgatg
gatgccgagcctgtcgaggaagtccttccaaaatttctggactttgtgggagatgcggtt
ctggtagcccacaatgcaggatttgatgtcagttttattgagcagaactgtagatatcag
gagatcgagaaggaatttatatcggtggatacggtggccctcgcccgggtgctccttccg
actctttccaagtataagctgaatgttgtggcaaaggcactgaacatttcgctggaaaat
catcaccgggccgtggatgatgcccaggcgacggccgagatttttgtccggtttgtcgaa
atgctgaaagacagggaaatttttacattgaaagagctgaatcacttcggctccatgaat
ccggacgcaatccggaaacttccgtcccaccatgcggtcattctggcgaaaaacgagacc
gggcgtgtgaatctgtaccgcctgatttccatgtcccacctgcagtatttttccagaatg
ccgagaattccaaagagcgaatttttacggtacagggacggactcattatcggaagcgcc
tgtgaggcaggcgaactgttccaggctgtcttaaatggaaaatcagaagaacagatcgca
aagctggtgaatttctatgattatctggaaatccagccgatcgggaataaccggttcatg
attgcaagcgaccgtgtttccaatgtaaaaagcgaggaggacctgcgggatttgaaccgg
aaaattgtaaggcttggcgagaaattctgcaaaccggttgtggcaacctgcgatgttcat
ttcctggatccggaggacgaggtctaccgtagaatcatcatggcgggaaaaggcttttct
gatgcggatgaacaggcaccgttgtatctgcatacgacggaagagatgatggaggagttt
tcctacctcggagcggcaaaagcccatgaggttgtaattgagaatccgaataagattgcg
gacatgattgaaaagattgctccggtccgaccggacaaatgtcctccggtcattgaaaat
tccgatcagaccctgcgtgatatctgttataaaaaagcccatgaaatgtatggagatccc
ctcccggacgtcgtgacggaacggctggagagggagcttcattctattatctccaatgga
ttcgccgtgatgtatattattgcccagaagctggtatggaagtccaatgaggatggatat
ctggttggttcccgtggatcagtcggatcttcctttgtcgctaccatggcaggaatcacg
gaggtcaatccgctaagcccgcattattattgtccgcactgccattacagtgactttgat
tccgaggaagtacgcgcgtttgcggggggctgcggatgggatatgaaggacaaggactgc
ccggtatgcggacatccgctcgtcaaagacgggttcgatatcccgtttgagactttcctt
gggtttaaaggaaacaaagagccggatattgacctgaacttttcgggagattatcagagt
aacgctcacaagtatacggaagtcatctttggaaaagggcagacgttccgcgcagggacc
atcggtaccctggcggacaagaccgcattcggatttgtgaagaactattatgaagagcgg
ggcagcaggaagcgaaactgtgagatcgaccggatcgtgcagggatgtacgggaatccgg
agaagtacagggcagcatccgggaggaattatcgttcttcctcacggtgaggacatcaac
tcctttaccccggtgcagcatccggcaaatgatatgaatacggatatcattacgactcat
tttgactaccactccattgaccacaacctattaaagcttgacattctgggacacgatgat
ccgaccatgatcaagacactggaggagctgatcaattcggacgccatggacaatgaatat
gacggcgtagagaatgtatttgacgccagagatattccgctggatgacccgaaagtcatg
tcgctgtttgccaatacggaggcactcggcatcacgccggatgacattgacggatgtccg
gttggatgccttggtattccggagttcggaacggactttgttatccagatggtagtagat
acaaagccaaagaccctctccgacctgatccggatttccgggctttcccacggaaccgat
gtgtggctgaataatgcgcagacgttgattcaggagggaaaggcaacgatttccacggcg
atctgtacccgtgatgatattatgacttacctcatcaacaaagggatggacagtgagctc
tcttttacgatcatggagaaagtgcgaaagggaaaaggactcacgccggagtttgaagag
tcgatgaaagaggctggagtaccggactggtatatctggtcctgtaagaagatcaagtat
atgttcccgaaagcgcatgcggccgcctatgttatgatggcataccggattgcctactgt
aaggtcaactatccacttgcgtattatgctgcctactttggaatccgtgcagacgccttt
tcctatgagctgatgtgtcagggaaaggaaaaactggcataccatatccgggaatataaa
agcagacaggaccggctgagtaaaaaagagcaggatacgatgaaagatatgaagatcgtg
caggaaatgtatgcgcgaggtctggagtttatgccgattgatatttatgaggcaaaagcg
accaagttccggattgtggacggaaagctgatgccgcccctttccagtatcgatggaatg
ggagacaaggcggcagaagcggtggaacaggcagcgagggacggcaggtacctttcaaaa
gatgatttccgacagagaaccaaggccagcaagacggtgattgataagatgtcggaactg
ggacttctttccgatcttccggaatccaatcagttatctctgtttgattttgcagattaa
DBGET
integrated database retrieval system