KEGG   Sellimonas catena: ACI3DN_12365
Entry
ACI3DN_12365      CDS       T10804                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
scaz  Sellimonas catena
Pathway
scaz03030  DNA replication
scaz03430  Mismatch repair
scaz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scaz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACI3DN_12365
   03430 Mismatch repair
    ACI3DN_12365
   03440 Homologous recombination
    ACI3DN_12365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scaz03032]
    ACI3DN_12365
   03400 DNA repair and recombination proteins [BR:scaz03400]
    ACI3DN_12365
Enzymes [BR:scaz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ACI3DN_12365
DNA replication proteins [BR:scaz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ACI3DN_12365
DNA repair and recombination proteins [BR:scaz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ACI3DN_12365
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NI HHH_6 DNA_pol3_a_NII Rv2179c-like tRNA_anti-codon RNase_H_2 DEDDh_C Auto_anti-p27 DZR
Other DBs
NCBI-ProteinID: XKQ70514
LinkDB
Position
2510732..2515231
AA seq 1499 aa
MGKDFFEVFPTLNLSEETKFLLKDVRVTKVSTNSTRDFIRIYLFSTHLLQKKKIYELEYA
IKHQLFDRTMIQVEILESYQLSEQYTPENLMHEYYDSILLELEQRSAVERSMFEHADYDF
EDSVLNLKLQNSIVAEGKKEAIVSLLSEVFNDRFHVPLSIKVGYQPPKKKSALEFNELQL
QAEVDEIIERNEALRKEKRKNTEEADAGENGTKEEKTKSAPKTLKEKRFGKEMKKPFVRR
DFRKSDDPNMIYGRDFDDPPIELSQVLGEMGEITIRGKVISFDTREIRNEKTILMFAITD
FTDTIVVKMFARNDQLPDLLGDIKKGAFLKVKGITTIDKFDGELTIGSVSGIRKISDFTV
QRKDLYPEKRVELHCHTKMSDMDGVSEVKDIVKRAHDWGHKAIAITDHGVVQAFPDANHY
IESLDKDDPFKIIYGVEAYLVDDLTEIAQGAKDQTLQDTYVVFDLETTGFSPIQDKIIEI
GAVKVEHGAITERFSTFVNPKIPIPFKITDLTGITDDMVMDAEPVEEVLPKFLDFVGDAV
LVAHNAGFDVSFIEQNCRYQEIEKEFISVDTVALARVLLPTLSKYKLNVVAKALNISLEN
HHRAVDDAQATAEIFVRFVEMLKDREIFTLKELNHFGSMNPDAIRKLPSHHAVILAKNET
GRVNLYRLISMSHLQYFSRMPRIPKSEFLRYRDGLIIGSACEAGELFQAVLNGKSEEQIA
KLVNFYDYLEIQPIGNNRFMIASDRVSNVKSEEDLRDLNRKIVRLGEKFCKPVVATCDVH
FLDPEDEVYRRIIMAGKGFSDADEQAPLYLHTTEEMMEEFSYLGAAKAHEVVIENPNKIA
DMIEKIAPVRPDKCPPVIENSDQTLRDICYKKAHEMYGDPLPDVVTERLERELHSIISNG
FAVMYIIAQKLVWKSNEDGYLVGSRGSVGSSFVATMAGITEVNPLSPHYYCPHCHYSDFD
SEEVRAFAGGCGWDMKDKDCPVCGHPLVKDGFDIPFETFLGFKGNKEPDIDLNFSGDYQS
NAHKYTEVIFGKGQTFRAGTIGTLADKTAFGFVKNYYEERGSRKRNCEIDRIVQGCTGIR
RSTGQHPGGIIVLPHGEDINSFTPVQHPANDMNTDIITTHFDYHSIDHNLLKLDILGHDD
PTMIKTLEELINSDAMDNEYDGVENVFDARDIPLDDPKVMSLFANTEALGITPDDIDGCP
VGCLGIPEFGTDFVIQMVVDTKPKTLSDLIRISGLSHGTDVWLNNAQTLIQEGKATISTA
ICTRDDIMTYLINKGMDSELSFTIMEKVRKGKGLTPEFEESMKEAGVPDWYIWSCKKIKY
MFPKAHAAAYVMMAYRIAYCKVNYPLAYYAAYFGIRADAFSYELMCQGKEKLAYHIREYK
SRQDRLSKKEQDTMKDMKIVQEMYARGLEFMPIDIYEAKATKFRIVDGKLMPPLSSIDGM
GDKAAEAVEQAARDGRYLSKDDFRQRTKASKTVIDKMSELGLLSDLPESNQLSLFDFAD
NT seq 4500 nt   +upstreamnt  +downstreamnt
atgggaaaagacttttttgaagtgtttccgactctgaacctttcggaggagacaaaattt
ctgctgaaagatgtcagggttacgaaagtttcaacgaattcaacaagagattttatccgg
atttatctgttttccacccatcttctgcagaaaaagaagatttatgaactggaatatgct
atcaagcaccagttgtttgaccggacgatgatccaggtggagattctggagagctatcag
ctgtcagagcagtatacgccggaaaacctgatgcacgagtattatgacagtatccttctg
gagctggagcagagaagcgccgttgagagaagcatgtttgagcatgcggactatgatttc
gaggacagcgttctgaatctgaagcttcagaattctatcgtggcagaaggaaagaaggag
gcgattgtaagcctcctttccgaagtgtttaatgaccgttttcatgtgcctctttccatt
aaagtcggctatcaaccgccgaaaaaaaagagcgcgcttgagtttaacgaacttcagctt
caggcagaagtggatgaaattattgagagaaacgaggcactccgcaaggagaaacggaaa
aatacggaagaggcggatgccggagaaaacgggacaaaagaagagaaaacaaaatctgct
ccaaagacattgaaagaaaagcggtttggaaaagagatgaagaaaccgtttgtcagacgt
gatttcagaaaatcggatgatccgaacatgatttacggacgtgacttcgatgatcctccg
atcgaactctcccaggtgttgggtgagatgggcgagatcactatccggggaaaggtcatc
agctttgatacgagagagatccggaatgaaaagacgatcctcatgtttgccatcaccgat
tttacagatacgatcgttgtcaagatgtttgccagaaacgaccagctcccggacctgctt
ggcgacattaaaaagggtgcattcctgaaagtaaaggggattaccacgatcgacaaattt
gatggggagctgaccatcggttctgtgagcggaatccggaaaatcagtgacttcaccgtg
cagagaaaggatctctatccggaaaagcgtgtagagctgcactgtcatacgaaaatgagc
gatatggacggggtatcggaagtcaaagatattgtaaagcgtgcgcatgactggggacac
aaagcgattgccattacggaccacggtgtcgttcaggcattcccggatgccaaccactat
atcgaatctctggataaagacgatccgtttaaaattatttacggcgtggaggcgtatctg
gtggatgatctgacggagattgcccagggggcgaaggaccagactcttcaggatacatat
gtggtatttgacctggagacgaccggattcagcccgattcaggataagattatcgagatc
ggagcggtcaaggtggaacatggagcgatcacagaacgtttcagtactttcgtcaatccg
aagattccgattccgtttaagatcacggatctgaccggtattaccgatgacatggtgatg
gatgccgagcctgtcgaggaagtccttccaaaatttctggactttgtgggagatgcggtt
ctggtagcccacaatgcaggatttgatgtcagttttattgagcagaactgtagatatcag
gagatcgagaaggaatttatatcggtggatacggtggccctcgcccgggtgctccttccg
actctttccaagtataagctgaatgttgtggcaaaggcactgaacatttcgctggaaaat
catcaccgggccgtggatgatgcccaggcgacggccgagatttttgtccggtttgtcgaa
atgctgaaagacagggaaatttttacattgaaagagctgaatcacttcggctccatgaat
ccggacgcaatccggaaacttccgtcccaccatgcggtcattctggcgaaaaacgagacc
gggcgtgtgaatctgtaccgcctgatttccatgtcccacctgcagtatttttccagaatg
ccgagaattccaaagagcgaatttttacggtacagggacggactcattatcggaagcgcc
tgtgaggcaggcgaactgttccaggctgtcttaaatggaaaatcagaagaacagatcgca
aagctggtgaatttctatgattatctggaaatccagccgatcgggaataaccggttcatg
attgcaagcgaccgtgtttccaatgtaaaaagcgaggaggacctgcgggatttgaaccgg
aaaattgtaaggcttggcgagaaattctgcaaaccggttgtggcaacctgcgatgttcat
ttcctggatccggaggacgaggtctaccgtagaatcatcatggcgggaaaaggcttttct
gatgcggatgaacaggcaccgttgtatctgcatacgacggaagagatgatggaggagttt
tcctacctcggagcggcaaaagcccatgaggttgtaattgagaatccgaataagattgcg
gacatgattgaaaagattgctccggtccgaccggacaaatgtcctccggtcattgaaaat
tccgatcagaccctgcgtgatatctgttataaaaaagcccatgaaatgtatggagatccc
ctcccggacgtcgtgacggaacggctggagagggagcttcattctattatctccaatgga
ttcgccgtgatgtatattattgcccagaagctggtatggaagtccaatgaggatggatat
ctggttggttcccgtggatcagtcggatcttcctttgtcgctaccatggcaggaatcacg
gaggtcaatccgctaagcccgcattattattgtccgcactgccattacagtgactttgat
tccgaggaagtacgcgcgtttgcggggggctgcggatgggatatgaaggacaaggactgc
ccggtatgcggacatccgctcgtcaaagacgggttcgatatcccgtttgagactttcctt
gggtttaaaggaaacaaagagccggatattgacctgaacttttcgggagattatcagagt
aacgctcacaagtatacggaagtcatctttggaaaagggcagacgttccgcgcagggacc
atcggtaccctggcggacaagaccgcattcggatttgtgaagaactattatgaagagcgg
ggcagcaggaagcgaaactgtgagatcgaccggatcgtgcagggatgtacgggaatccgg
agaagtacagggcagcatccgggaggaattatcgttcttcctcacggtgaggacatcaac
tcctttaccccggtgcagcatccggcaaatgatatgaatacggatatcattacgactcat
tttgactaccactccattgaccacaacctattaaagcttgacattctgggacacgatgat
ccgaccatgatcaagacactggaggagctgatcaattcggacgccatggacaatgaatat
gacggcgtagagaatgtatttgacgccagagatattccgctggatgacccgaaagtcatg
tcgctgtttgccaatacggaggcactcggcatcacgccggatgacattgacggatgtccg
gttggatgccttggtattccggagttcggaacggactttgttatccagatggtagtagat
acaaagccaaagaccctctccgacctgatccggatttccgggctttcccacggaaccgat
gtgtggctgaataatgcgcagacgttgattcaggagggaaaggcaacgatttccacggcg
atctgtacccgtgatgatattatgacttacctcatcaacaaagggatggacagtgagctc
tcttttacgatcatggagaaagtgcgaaagggaaaaggactcacgccggagtttgaagag
tcgatgaaagaggctggagtaccggactggtatatctggtcctgtaagaagatcaagtat
atgttcccgaaagcgcatgcggccgcctatgttatgatggcataccggattgcctactgt
aaggtcaactatccacttgcgtattatgctgcctactttggaatccgtgcagacgccttt
tcctatgagctgatgtgtcagggaaaggaaaaactggcataccatatccgggaatataaa
agcagacaggaccggctgagtaaaaaagagcaggatacgatgaaagatatgaagatcgtg
caggaaatgtatgcgcgaggtctggagtttatgccgattgatatttatgaggcaaaagcg
accaagttccggattgtggacggaaagctgatgccgcccctttccagtatcgatggaatg
ggagacaaggcggcagaagcggtggaacaggcagcgagggacggcaggtacctttcaaaa
gatgatttccgacagagaaccaaggccagcaagacggtgattgataagatgtcggaactg
ggacttctttccgatcttccggaatccaatcagttatctctgtttgattttgcagattaa

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