Sellimonas catena: ACI3DN_14070
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Entry
ACI3DN_14070 CDS
T10804
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scaz Sellimonas catena
Pathway
scaz03420
Nucleotide excision repair
scaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACI3DN_14070
03430 Mismatch repair
ACI3DN_14070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaz03400
]
ACI3DN_14070
Enzymes [BR:
scaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACI3DN_14070
DNA repair and recombination proteins [BR:
scaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACI3DN_14070
MMR (mismatch excision repair)
Other MMR factors
ACI3DN_14070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_11
SdiA-regulated
BAR_4
AAA_14
Motif
Other DBs
NCBI-ProteinID:
XKQ70828
LinkDB
All DBs
Position
complement(2815068..2816936)
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AA seq
622 aa
AA seq
DB search
MEKKHSGGERPPLSDFNEAQREAVCHREGPCMVLAGPGSGKTAVITGRLEWMIRHFRIRP
EEILVITFTKYAVKEMKERFLARMGLKHCPVTFGTFHGIYYGMLRQIYHLAPDQILTEEE
QKAMAEAAVRDVERENRKRPKDKDVLLMIGKVKNNGGFSGITDDPEDRQIYHAYEKRKKE
AGRIDFDDMLLLCYQLFCRQPQILKKWQERYPYILIDEFQDSSKIQYEIIKLLAGKRANL
FVVGDDDQAIYGFRGATPGIMKQFMEDFPQASLVRLSVNYRSSAFIVQASGKVIRKNKFR
FSKDLEAVHDRGKPVHVQELKDMEQEAEYVAAAAKKKLEEGVPPEEIAVIFRTVQDASMV
MSAFMNRGIPFFMKEKAFHLFEHFIAEDMKAYFRIAMGERNRSDFLRVINRPNRYISRSA
LEKERTDFEDLKLFYCDKEWMLDRIDAFEEDMEAVSRMAPYAAFQFLLKKTGYQEYLKEY
SQKMQLEEAELTEIVDELAQSMKKMDTMKEWIEFTQVYTDRIRQMEKEEKFTKGKTALLT
MHGAKGLEYRCVYIIEAQEGSIPHRKAIVEEEIEEERRLFYVAMTRAKEELSICYVKEKN
GKEVYPSRFVQELFTRPRQEAR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagcacagcgggggagaaagacccccgctttccgattttaatgaggcacag
agggaggcggtctgccaccgtgaaggaccatgtatggtccttgcaggaccgggttccgga
aagacggctgtgattacgggacgtctggaatggatgatccgccatttcaggatccggcct
gaggagatactggttattaccttcaccaagtatgcggtaaaggaaatgaaagagcgtttc
cttgcccggatgggactgaaacattgtccggtgaccttcgggacattccacggcatttat
tatggaatgctccgtcagatttatcatcttgctccggatcagattttgacggaagaagaa
cagaaggccatggcagaagcagcggtcagggatgtggaaagagaaaaccggaaacgcccg
aaagacaaagatgtccttcttatgatcgggaaggtaaaaaataacgggggattttccgga
attacggatgatccggaagaccggcagatctaccatgcttacgagaagcggaaaaaagag
gccggccggatcgattttgatgatatgcttctgctgtgttatcagttattctgtcgtcag
cctcagatcctaaagaaatggcaggaacgatatccttacattttgatcgacgagtttcag
gacagcagcaaaatacagtacgagattatcaaattacttgcggggaagagggcgaacctt
tttgtggtaggagatgatgatcaggcaatttacgggtttcgcggggccacaccgggcatc
atgaaacagtttatggaggattttcctcaggcatcgcttgtccggctatccgtgaactac
cggagcagcgcgtttattgtacaggcttccggaaaagtgatccggaaaaacaagttccgc
ttttccaaagatcttgaagcggtccatgaccggggaaagccggttcatgtacaggaatta
aaagacatggagcaggaggctgagtatgtcgcagccgctgcaaaaaagaaactggaagaa
ggagtgccgccggaagagatcgcagtcattttccggaccgtacaggacgcttctatggta
atgtccgcctttatgaaccgggggattcctttttttatgaaagaaaaagcattccatctc
tttgagcattttattgcggaagatatgaaggcatattttcggattgccatgggggaaaga
aaccgcagtgattttctgcgggtaatcaaccgcccgaaccgttacatcagccggagtgct
ctggagaaagagcggacagattttgaggatctgaaattattttactgtgataaagagtgg
atgctggacagaattgatgctttcgaagaagatatggaggcagtttccagaatggcgcca
tatgcggcatttcagtttcttctgaaaaagaccggatatcaggagtatctgaaagagtat
tcgcagaagatgcagcttgaggaggcagagcttaccgagattgtagatgaacttgcccag
agcatgaaaaagatggataccatgaaagagtggattgaattcacacaggtttatacagac
cggatccgtcagatggaaaaggaagaaaaatttacaaaggggaaaacagctttgctgacg
atgcacggagccaaaggcctggaataccgctgtgtttatattattgaagcgcaggaaggc
agtattccccacaggaaagccattgtggaagaggaaatcgaagaggagagaaggctgttt
tatgttgccatgacgcgcgcaaaggaagagctttccatctgttatgtcaaagaaaaaaac
gggaaggaagtttatccatcccgttttgtccaggaactatttactcgtcctcgtcaagaa
gctcgttaa
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