Sellimonas catena: ACI3DN_14710
Help
Entry
ACI3DN_14710 CDS
T10804
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scaz Sellimonas catena
Pathway
scaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACI3DN_14710 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scaz03019
]
ACI3DN_14710 (recQ)
03400 DNA repair and recombination proteins [BR:
scaz03400
]
ACI3DN_14710 (recQ)
Enzymes [BR:
scaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACI3DN_14710 (recQ)
Messenger RNA biogenesis [BR:
scaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACI3DN_14710 (recQ)
DNA repair and recombination proteins [BR:
scaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACI3DN_14710 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XKQ70948
LinkDB
All DBs
Position
complement(2947095..2949395)
Genome browser
AA seq
766 aa
AA seq
DB search
MQELLDQQLHSTLKTYFGYDTFRPEQETVIRQILSGRDVFAVMPTGAGKSLCYQLPALML
PGITIVVSPLISLMIDQVKALNEAGVHAAYINSALTENQIVKAMELAKTGQYKIIYVAPE
RLETPRFLDFACHAEISMITVDEAHCISQWGQDFRPSYLRILSFVHMLPVRPVVSAFTAT
ATERVRTDIRVSLELEHPYETVTGFDRENLYFEVQRTKQKKERIRRYLEDHIEESGIIYC
ATRKGVDELYLELENAGFSVGRYHAGMSTEARRISQEDFIYDRTKVMIATNAFGMGIDKS
NVRFVLHFNMPQSMENYYQEAGRAGRDGEPAECILYYSPQDTVINRFLLESKEQDREYTE
EELRTIQAQDMDRLRKMEMYCTTTKCLRAYILHYFGEKAKEQCRNCSNCQEEFEEMDASE
AAADVILCVRTSGQRFGMNMIAGTLLGENTAKIRNYRMEENPAYGKQSKLGQTRIKEIIR
TMVERGYLRQTEDKYAILHLTGTSGELMEQNTPFIIAYKKEEEKKRDSKKSVLAMDLSEK
GKELFESLRELRAELARRRSIPPYMVASDKTLRDLCVRMPFTKEELLKVNGMGERKAEQY
GEAILQKIQSVTGGQRDTEENQNSGPEDEIPLTERRGKGRKEDFRLTKEILFGIQYTPRM
TLSEFVSQVNELRDEKQMKRLTNKWLTERLLEEGCLKQQFYNGYARTVLTEKGRKAGIEP
EERISEKGNPYEIFFYTEKAQRYLVELMKGGRKRNMDCTISYFMLN
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagttacttgaccaacaactgcactccaccctcaaaacctactttggttatgac
acatttcgaccagaacaggagacggtcatcagacagatcctttctggaagagatgtattt
gcagtcatgcccaccggagcagggaaatcactttgctatcagcttcctgcactgatgctt
cctgggattacgattgtcgtgtcgcctctgatttccctgatgatcgatcaggtgaaggcg
ttgaatgaagctggcgtgcatgcggcctatattaacagtgctctgacggaaaatcagatt
gtaaaagcgatggagctggcaaagaccggacagtataagattatctatgtggcgccggag
cgtcttgagacgccccggtttttggattttgcctgtcacgcggagatttccatgattacg
gtggatgaagcccactgtatctctcagtggggtcaggatttcagaccaagctatcttcga
attctgtcttttgtacatatgcttccggtccgcccggttgtttcggcatttacagctact
gcaaccgagcgggtcagaactgacatccgcgtttctttggagctggaacatccttatgag
acggtaaccggattcgacagagaaaatctgtactttgaagtacagagaacaaagcagaaa
aaggagaggatccgccgttatctggaagatcacatagaagagagcgggatcatttactgt
gctaccagaaagggcgtggatgaattatatctggagctggagaacgctggattttctgtc
gggcgttatcatgcaggaatgagcacggaggcaagaagaatcagtcaggaggacttcatt
tatgaccggacaaaggtaatgattgccaccaatgcgtttgggatggggattgacaaatcc
aatgtacggtttgtccttcacttcaatatgccccagagtatggaaaattactatcaggag
gccggaagagcaggacgtgacggcgaaccggcagaatgtattttgtattattcgccgcag
gatacggtcattaaccgattccttctggagagtaaggaacaggacagagaatatacggaa
gaggaactaaggacgattcaggcacaggacatggaccgcctgcgaaagatggagatgtac
tgcacaacgacgaaatgtctcagggcatatattcttcattattttggagaaaaggcaaaa
gagcagtgccggaactgttccaactgtcaggaagagtttgaagaaatggatgcttccgaa
gcggcagcagatgtcatcctatgtgtcaggacatccggacagaggtttggaatgaacatg
atcgccgggactcttctgggagaaaacacggcaaaaatacgtaattacagaatggaagaa
aaccctgcttatggaaaacagagtaagcttggacagacgaggatcaaggaaattatccgt
acaatggtggagcgaggatatctgagacagacggaggataagtatgccatcctccatctg
acgggaacttctggagaattgatggagcaaaatactccttttatcatcgcatataaaaaa
gaagaagagaaaaagcgggacagtaaaaaatccgttctcgcgatggatttatcggaaaag
gggaaagagttgtttgaatcactgcgggaacttcgcgcagaacttgcaagaagacggtcg
atacctccatatatggtggcttcggataaaacgcttcgtgatctgtgcgtacgcatgccg
tttacaaaagaagaacttctgaaagtaaatggcatgggtgaacggaaagcagagcagtac
ggagaagccattttacaaaaaattcaaagcgtaaccggagggcagcgggatacagaagaa
aatcaaaattcaggtccggaagatgaaattccattgacggaaaggcggggaaaagggcga
aaagaagactttcggctgacgaaagagattctttttggcattcagtatacgccaagaatg
acattaagcgaatttgtttcgcaggtgaatgaattaagagatgaaaaacagatgaaacgt
ttgacaaataaatggcttacagaaagacttctggaagaaggctgtctgaaacaacagttt
tataacggatatgccagaacagtattgacagaaaaaggaagaaaggccggaattgagccg
gaagaacggatcagtgaaaaagggaatccgtatgagatctttttctatactgaaaaagcg
cagagatatctggtggaattgatgaaaggaggaagaaaaagaaacatggattgtaccatc
tcctattttatgctaaactaa
DBGET
integrated database retrieval system
