Sellimonas catena: ACI3DN_15025
Help
Entry
ACI3DN_15025 CDS
T10804
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scaz Sellimonas catena
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaz03032
]
ACI3DN_15025 (topA)
03400 DNA repair and recombination proteins [BR:
scaz03400
]
ACI3DN_15025 (topA)
Enzymes [BR:
scaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACI3DN_15025 (topA)
DNA replication proteins [BR:
scaz03032
]
Prokaryotic type
DNA Topoisomerases
ACI3DN_15025 (topA)
DNA repair and recombination proteins [BR:
scaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACI3DN_15025 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Zn_ribbon_8
HypA
HVO_2753_ZBP
Zn_Ribbon_TF
Toprim_2
Zn_ribbon_GRF_2
DUF7575
Motif
Other DBs
NCBI-ProteinID:
XKQ71009
LinkDB
All DBs
Position
complement(3010069..3012141)
Genome browser
AA seq
690 aa
AA seq
DB search
MARYLVIVESPAKVKTIKKFLGSNYVVMASQGHVRDLPKSQLGIDVEHDFEPKYITIRGK
GEILAQLRKEVKKADKIYLATDPDREGEAISWHLTKALKLEGKKVYRISFNEITKNAVKE
SIKNAREIDMNLVDAQQARRALDRIVGYKISPLLWKKVKRGLSAGRVQSVALRIIADREA
EIDAFIPEEYWTLDAVLKVQGEKKPLRAKFYGTKTEKIVIRSAEEEQKIEKELENADFHV
AEVRKGERTQKSPLPFTTSTLQQEASKVLNFATQKTMRIAQQLYEGIDIKGQGTVGIITY
LRTDSTRVSEEAERLAREYISSVYGAEYVADTEKKKDGGKNIQDAHEAIRPTDISRTPAS
LKESLSRDQFRLYQLIWKRFAASQMQPARFETTSVKIDAGNYRFTVAASKIAFDGFRSVY
VQPDEEKAENNVLLKGLDEQSVLTKEDFEKKQHFTQPPAHYTEASLVKALEELGIGRPST
YAPTISTIIARRYVAKENKNLYLTELGEVVNNMMLKSFPSIVDVNFTANMEGLLDRVAEG
KVQWKSVISNFYPDLEEAVEIAEKELEEVKIEDEVTDVICEECGRNMVIKYGPHGKFLAC
PGFPECRNTKPYLEKAGVSCPKCGKDVVIRKTKKGRRYYGCENNPECDFMSWQKPSDRKC
PKCGSYMVEKGNKLVCSDTSCGYVEKKEKK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttatctggtgattgtggagtcacctgcgaaagtaaaaacgatcaaaaaattt
ctgggaagcaattatgtggtgatggcatcccagggacatgtgcgcgatctgccgaaaagc
cagctcggtattgatgtagagcacgattttgaaccaaagtatattactattcgcggaaaa
ggagagatccttgcgcagcttcgcaaagaggtcaaaaaggcggacaagatttatcttgcg
actgaccctgaccgtgaaggagaagcaatttcatggcatctgaccaaggcgctgaaactg
gaagggaaaaaggtttaccgtatcagttttaacgagatcacaaagaacgcagtcaaggag
tccatcaagaacgcccgggaaatcgatatgaatctggttgacgcacagcaggcgagaagg
gcgcttgacaggattgtaggatataaaatcagccctttgctctggaagaaggtaaaacgc
ggcttaagtgcaggccgggtacagtctgtggcacttcggattattgcggatagagaggcg
gagattgatgcgtttataccggaagagtactggacgctggacgcggttttaaaggtacag
ggagagaaaaagcctctgcgtgccaaattctatgggacgaaaacagaaaaaatagtgatt
cgttctgccgaagaagaacagaagatagaaaaagaacttgagaatgccgattttcatgtt
gcagaggtcagaaaaggagagcgcacccagaagtctccgcttccgtttactaccagtacc
ctgcagcaggaagcatccaaggtactgaattttgcgacacagaagacaatgcggattgcc
cagcagctatatgaaggaattgatatcaagggtcagggaacggttggtatcattacctat
ctccgtacggattccacccgtgtttccgaggaagcggagcgtcttgcgagagaatatatc
tcctctgtttacggtgcagaatatgtagcggacacagaaaagaaaaaggacgggggaaaa
aatattcaggatgcccacgaggcaatccgtcctacggatatttccagaacaccggcttct
ctcaaagagtctctttcgagagaccagttccgcctgtatcagctgatctggaaacgcttt
gcggcgagccagatgcagccggcgagatttgagacgacttccgtcaagattgacgcgggc
aattaccggtttaccgttgcagcatccaaaatcgcatttgacggattccgttccgtttat
gtacagccggatgaagaaaaggcagagaacaatgtcctgctcaaagggctggatgaacag
tccgtcctgacaaaagaggattttgaaaagaagcagcactttacgcagccgccggcacac
tacacagaggcgtctcttgtaaaggcactggaggaactgggaatcggacggccgagtacg
tatgctccgacgatttccacgattattgcaagacgttacgttgcaaaggaaaataaaaat
ctttatctgaccgagctgggcgaagtagtcaacaatatgatgctgaaatctttcccaagt
attgtggatgtgaattttacagccaatatggaaggacttctggaccgggttgccgaaggc
aaagtgcagtggaaatcggtaatcagcaatttctatccggatctggaggaagcagtggaa
atagcggaaaaagagcttgaggaagtcaaaatcgaagatgaggtgaccgatgttatctgt
gaagaatgcggacggaatatggtcatcaaatacggacctcacgggaaattcctggcatgt
ccgggatttccggaatgccgcaatacgaagccgtatctggaaaaggcgggtgtatcctgc
ccgaaatgcggaaaggatgtggtaatccggaagaccaaaaaaggaagacgctactacgga
tgcgaaaataatccggaatgcgattttatgtcctggcagaagccgtctgacaggaaatgc
ccgaaatgcggcagttatatggtagaaaaagggaacaaacttgtatgctctgatacctcc
tgcgggtatgttgaaaaaaaagaaaaaaaataa
DBGET
integrated database retrieval system
