Sellimonas catena: ACI3DN_15275
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Entry
ACI3DN_15275 CDS
T10804
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
scaz Sellimonas catena
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACI3DN_15275 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scaz03021
]
ACI3DN_15275 (rpoD)
Transcription machinery [BR:
scaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACI3DN_15275 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF722
REF2_N
Snf7
Motif
Other DBs
NCBI-ProteinID:
XKQ71057
LinkDB
All DBs
Position
complement(3061404..3062522)
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AA seq
372 aa
AA seq
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MEENVAKFEEKLKELVELGKKKKKVLEIQEISDFMADLELSSEQMEKVYEYLEAMNIDVL
RIGNDDDLDADIDDLILAEEEEEVDMEKIDLSVPDGISIEDPVRMYLKEIGKVPLLSAEE
EIDLAKRMAEGDESAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFD
YQKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPLP
EEIAKELDMPVDRVREILKISQEPVSLETPIGEEEDSHLGDFIQDDNVPVPAEAAAATLL
KEQLNEVLDTLTDREQKVLRLRFGMNDGRARTLEEVGKEFDVTRERIRQIEAKALRKLRH
PSRSRKLRDYLD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacgtagcaaaatttgaggaaaagctgaaagagctggtcgaacttggaaaa
aagaaaaagaaagttctggaaattcaggagatcagtgattttatggctgatctggaatta
tcttcagagcagatggaaaaggtgtatgagtatctggaggcaatgaacatcgatgtgctg
cgtattggaaatgatgatgacctggacgcagatattgacgatctgattcttgcagaagaa
gaggaagaggtcgatatggaaaagatcgatctgtctgtgccggatgggatcagcattgag
gatccggtgcgtatgtacttgaaagaaatcggaaaggttcctcttttaagtgcagaagaa
gagattgatctggccaaaagaatggcggaaggcgatgagagtgccaaaaagagactggca
gaggcgaacctccgtcttgtagtcagcattgcaaagcgctatgtcgggcggggaatgctc
tttctggatctgattcaggaaggtaatcttggtctgatcaaggcggttgagaagtttgat
taccagaagggatttaagttcagtacctatgcgacctggtggatccgtcaggcaattacg
agagcgattgcggaccaggcgagaacgatccgtattcctgttcatatggtggagacgatc
aacaaactgatccgggtatccagacagctccttcaggagctcggaagagagccgcttccg
gaagagattgcaaaagaactggacatgcctgtggaccgtgtcagagagattttgaagatt
tcacaggaaccggtgtctcttgagacaccgatcggggaagaagaggacagccatcttggt
gatttcattcaggatgataatgtgccggttccggcggaagctgctgccgccacactgtta
aaggaacagctcaatgaagtgctggatacactgacagacagagaacagaaggtcttaaga
ctgcgttttggaatgaacgacggccgggcaaggacactggaggaagtcggtaaagagttt
gatgttacaagagaacgtatccgtcagattgaggccaaggcactgagaaaactgcgccat
ccaagccgcagccgtaaattaagagactatctggattag
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