Sellimonas catena: ACI3DN_18620
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Entry
ACI3DN_18620 CDS
T10804
Symbol
abc-f
Name
(GenBank) ribosomal protection-like ABC-F family protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
scaz Sellimonas catena
Pathway
scaz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scaz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ACI3DN_18620 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaz02000
]
ACI3DN_18620 (abc-f)
01504 Antimicrobial resistance genes [BR:
scaz01504
]
ACI3DN_18620 (abc-f)
Transporters [BR:
scaz02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
ACI3DN_18620 (abc-f)
Antimicrobial resistance genes [BR:
scaz01504
]
Gene variants
Macrolide resistance genes
Transporters
ACI3DN_18620 (abc-f)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_22
AAA
AAA_30
AAA_29
AAA_28
AAA_23
AAA_5
Rad17
NACHT
ORC-CDC6-like
TsaE
AAA_14
ABC_tran_Xtn
NB-ARC
ATP-synt_ab
G-alpha
Pox_A32
Nnf1
VPA1267
Motif
Other DBs
NCBI-ProteinID:
XKQ71672
LinkDB
All DBs
Position
complement(3745172..3746725)
Genome browser
AA seq
517 aa
AA seq
DB search
MSQIQIIDLTFSYDTHFESIFEHVSVLLDTDWRTGLIGRNGTGKTTFLKLLSGAYPYRGR
IRMSEMAEYFPVDIRDARKSSLEVLEEIDPDYEFWRVLREMEWMGMDSAILERPYGTLSP
GERIRLQLAVLFAKEHAFLLIDEPTNHLDEEGRQMLASYLSRKKGFLLVSHDRRLLDACT
DHTMAIERSSIRIYKGSFQTWQREKSLRDQAELEQNQKLKKEIRHLEAAAREAGRWAGNK
EKEKIGHKVGGLKPDRGAIGHKAAKMMKRSKVLEHRMEKAAKEKAGLLKDIETVEELKMF
PLDYEKERLVSVEGISFARGDRQILKDFSLEIRRGDRIALKGPNGCGKTTILKLIAGIYQ
PDEGRIQTGSGLKISVVSQDSSEMRGTLAELEEEAGLDKTLFRAVLRKLDFSRDQFDKRL
EEYSEGQRKKVLLAKSLCEPSHLYIWDEPLNYIDIFTRIQIENLILERKPSMIFVEHDSV
FTERIAKSAVRFEKDPQSAGFKAVFESSGLDKEQGDV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagatacagattatagatcttactttttcgtatgatacgcattttgagtcgatt
tttgagcatgtgagtgtgcttttggatacggactggaggacggggctgattggtcggaat
gggaccggaaagacgacgtttttgaagctgttatcgggtgcgtatccgtaccggggaagg
atccgcatgtcggagatggcggagtattttccggtggatatccgggatgcgaggaagtct
tctttggaggtcctggaggaaattgatccggattatgagttctggagagttttaagagag
atggaatggatgggaatggattcggccatcctggagcggccttatgggacgcttagtccg
ggagagcggatccggcttcagcttgcggtgctgtttgccaaggagcatgcgttccttctg
attgatgagccgacaaatcatctggatgaggaggggaggcagatgctggcctcttatctg
agcaggaagaagggattccttcttgtttcccatgaccggaggcttctggatgcctgtacg
gatcatacgatggcgattgagcgcagcagcatccggatctacaagggaagtttccagaca
tggcagagagaaaagagtctgcgggatcaggcggagttggagcagaatcagaagctgaaa
aaggagatccgccatctggaggcggcggcaagggaggccggaagatgggcaggtaataag
gagaaagaaaagatcggtcataaagtgggaggactgaagccggaccggggtgcaatcggc
cataaggcggcgaagatgatgaagcggtccaaggtgctggagcaccggatggagaaggcg
gctaaagaaaaggcagggcttttaaaggacatcgagacggtggaggaactgaaaatgttt
ccactggattatgagaaggagcgtcttgtttccgtggaagggatttcgtttgcccgcggg
gatcgtcagattttgaaagacttttcgttggaaatccggcggggagaccggatcgctttg
aaagggccgaatggctgcggaaagacgacgattctgaagctgattgcagggatctatcag
ccggatgagggaagaattcagaccggaagcggcctgaagatttcggttgtcagccaggat
tcttctgaaatgagaggaacgctggcggagctggaagaggaggcgggacttgataaaacg
ctgttccgggctgttttgaggaagcttgatttttccagagaccagtttgacaagcgtctg
gaggagtacagcgagggtcagcgtaaaaaggtgcttcttgcaaagagcctctgcgagccg
tcccatctatatatctgggacgagccgttaaactacattgatatattcacaagaattcag
attgagaatctgattcttgagcggaaaccatccatgatctttgtagaacacgacagtgta
tttaccgaacggattgcaaagagcgctgtacgtttcgaaaaagatcctcaaagcgccgga
tttaaagcagttttcgagagttccggacttgacaaagagcagggggatgtttaa
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