Streptomyces scabiei: SCAB_10101
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Entry
SCAB_10101 CDS
T01187
Name
(GenBank) putative secreted penicillin binding protein
KO
K05364
penicillin-binding protein A
Organism
scb
Streptomyces scabiei
Pathway
scb00550
Peptidoglycan biosynthesis
scb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCAB_10101
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scb01011
]
SCAB_10101
Peptidoglycan biosynthesis and degradation proteins [BR:
scb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SCAB_10101
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
CBG68186
UniProt:
C9Z3C9
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All DBs
Position
complement(1140547..1141920)
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AA seq
457 aa
AA seq
DB search
MHSMIRGALGVSGVLAALAALSTGCSRGGSPTDSADDKPSGTPGSQSASSPSSHRGLGDI
LVGGRAVTGSKPSGNKKVPYQRTYSDGSVYAPVTGYRTMVYGNAGLEAVYDDVLAPDPSG
DAPGDVSTTIDPGAQKAAFDALGDRQGAAVALDAESGKILALVSTPSYDPAAFGGQRPAD
AKAWKTLNAADPSPLRNQALHRIGSPGTTFSVVVAAAALEAGLYETVDESTSSPLTYVLP
RTVTRVTGASPRCEDASIKEALRSSCDNVFVKMAAELGADRLRATAEKFGFDDDTLTVPV
KASGSSYPQGDVPAPDTALTGIGGGDVRATPLQMARVAAVVAGEGRLVAPQMVERVVKAD
GTTVKPEAPGGRAGQAVSRRTADALRTALGGGTGAGSGGTSAWVADGQKGSGTSWFITYA
DAEGGRPVAVAVCVEGSPSGKDDRAAEVADVLIAELS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcactcgatgatcaggggggcgctcggcgtctcgggtgttctcgccgcgctggccgct
ctgtcgaccggctgcagcaggggcggctcacccaccgactccgccgacgacaagcccagc
ggcacacccggttcgcagtctgcctccagtccgtcgtcgcaccgcgggctcggcgacatc
ctcgtcggcggcagggccgtcacagggtcgaagccctcgggcaacaagaaggtgccctac
cagcgcacttactccgacggatcggtctacgcgccggtcaccggctaccggacaatggtg
tacggcaacgcgggactggaagccgtgtacgacgacgtactggccccagacccatccggt
gacgcaccgggtgacgtctccacgacgatcgaccccggcgcccagaaagccgcgttcgac
gcgctgggcgaccggcagggagcagcggtggctctcgacgccgagtccgggaagattctc
gcgctggtcagcaccccctcctacgacccggcggcgttcggcggacagcgaccggcggac
gcgaaagcgtggaagaccctcaacgccgccgacccctcgcccctgcgcaaccaggcgctg
caccggatcggctcccctggcacgaccttcagcgtcgtcgtcgcggcggccgcgctggag
gccggactgtacgagacggtggacgagagcaccagcagcccgctcacctatgtcctgccc
cggacggtcacccgcgtgaccggcgcgtctccccgctgcgaggacgcttcgatcaaggag
gcgttgcgctcctcctgcgacaacgtcttcgtcaagatggccgccgaactcggcgcggac
cgactccgggcgacggcggagaagttcggcttcgacgacgacacgctgaccgtgccggtg
aaggcctccgggagcagctacccccagggagacgtaccggccccggacacggcgctgacg
ggtatcggtggcggagacgtccgggcgaccccgcttcagatggccagggtcgcggccgtg
gtcgcgggcgaggggcgactcgtggccccgcagatggtggagcgggtggtgaaggccgac
ggcaccaccgtcaagcccgaggcaccaggcggcagggccgggcaggccgtctcccgccgc
acggccgacgcgctgcggacggcgctcgggggtgggacgggggccgggtccggcggaacg
tccgcgtgggtcgccgacggtcaaaaggggtccggtacctcatggttcattacgtacgcg
gatgcggagggcgggcggccggtcgccgtggcggtctgtgtcgagggttccccgtccgga
aaggacgaccgggctgccgaggtcgccgacgtactcatcgccgaactctcctga
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