Streptomyces scabiei: SCAB_12991
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Entry
SCAB_12991 CDS
T01187
Symbol
hopD
Name
(GenBank) putative squalene/phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
scb
Streptomyces scabiei
Pathway
scb00906
Carotenoid biosynthesis
scb01100
Metabolic pathways
scb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SCAB_12991 (hopD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scb01006
]
SCAB_12991 (hopD)
Enzymes [BR:
scb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
SCAB_12991 (hopD)
Prenyltransferases [BR:
scb01006
]
Terpene biosynthesis
Squalene/phytoene synthase
SCAB_12991 (hopD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
CBG68457
UniProt:
C9Z829
LinkDB
All DBs
Position
complement(1458013..1458963)
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AA seq
316 aa
AA seq
DB search
MIRTVETEPHTSAPVLAAYSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDD
IGDGALAVEVKTARLEESRTLLTRVRGGSVDEDDTDPVAVALTHAQSAFPIPLDALDELI
DGVLKDVRGEYYETWDDLKVYCRCVAGSIGRLSLGVFGTEPGARGSERAPEYADTLGLAL
QLTNILRDVREDAEGGRTYLPTDDLAKFGCSAGFAGPLPPADSDFAGLVHFEVRRARALF
AEGYRLLPMLDRRSGACVAAMAGIYRRLLDRIEREPEAVLRGRVSLPGREKAYVAVRGLS
GLDTRHVSRRTVRRRV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgatccggaccgtggagacggaaccgcacacgtccgcgccggtactcgccgcctacagc
tactgcgaggccgtcaccggacagcaggcccgtaacttcgcctacggcatcaggctgctg
ccgacgcccaagcgccgcgcgatgtccgcgctgtacgccttctcccggcgcgtcgacgac
atcggcgacggcgcgctcgcggtcgaggtcaagacggcccggctggaggagagcaggacg
ctgctcacccgcgtccgaggcggctcggtcgacgaggacgacacggatcccgtcgcggtc
gccctcacccacgcgcagtccgccttcccgatcccgctcgacgcgctcgacgaactcatc
gacggcgtcctcaaggacgtacgcggcgagtactacgagacctgggacgacctcaaggtc
tactgccgctgcgtggccggatccatcggccggctctccctcggtgtcttcggcaccgaa
ccgggggcacgcggctcggaacgcgcgccggagtacgccgacaccctgggactcgcgctg
caactgaccaacatcctcagggacgttcgcgaggacgcggagggcggccgcacctacctg
cccaccgacgacctcgcgaagttcggctgctcggccgggttcgccgggccgctcccgccg
gccgactccgacttcgcgggtctggtgcacttcgaagtccgccgggcccgcgccctgttc
gccgagggctaccggctgctgccgatgctcgaccgccgcagcggcgcctgcgtcgcggcc
atggccggcatctaccgccggctgctggaccgcatcgagcgcgagccggaggccgtcctg
cgcggccgggtctcgctgcccggccgggagaaggcgtacgtggccgtgcgcggtctctcg
ggtctcgacacccgccacgtgtcgcgccgtaccgtcaggaggcgtgtctga
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