Streptomyces scabiei: SCAB_16491
Help
Entry
SCAB_16491 CDS
T01187
Name
(GenBank) putative WD-40 repeat protein
Organism
scb
Streptomyces scabiei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
nSTAND1
ANAPC4_WD40
Ge1_WD40
NBCH_WD40
RMC1_N
HTH_31
Cytochrom_D1
eIF2A
HTH_3
PROPPIN
HTH_19
HTH_25
HTH_26
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBG68784
UniProt:
C9ZD56
LinkDB
All DBs
Position
complement(1850745..1854641)
Genome browser
AA seq
1298 aa
AA seq
DB search
MGDPLHGQQTDPHHGRDRDAPTTLSFPAQLRRLRQERGLSLTDLARRTHYSKGYLSKIET
GAKRPTVDVARLCDQVLGAEGELLRLVRQTQPRDGDPATEADPVERQAAETCPYRGLSAF
TPEDAEWFFGRERATAALVERIFERVGGGPLMLVAPSGAGKSSLLSAGLVPALGRGDLPM
PGADRWPVVQLTPTARPLDELLERTAKALGGDLGLTAEEVRDDPGTLLGAVQAAAAAPPE
APGERRPPPPRPVLIVDQFEELFTLCTDEDERRSFARVLSALAGARPTASAHPPAVVVLG
VRADFTGSCLGLPELAPVFTGGLFVLSPMTVAELRESITRPAELAGLTLEPGLVPLLLRD
AGLRDDPDTGPGASGAGSDETPSGALPLVSHALLATWQRRRDSALTVDGYERAGGIQGAV
ARTAETVFARLYPAEQKTIRRILSRLVLVMDGAGATRRRMSRDALMARLGDADGAAAALD
AFVRARLITMDSDTVEITHEALLHAWPRLRGWIRADRAGLLLHQQLSHAAGEWERERRDP
SALYRGTRLDTVRAWADESDGWSRLAPDEEAFLRASQAEEDGRRGQARRQVRLRQSLLAT
LAVLLGLAVTAGGLAYQQRAGALDQERVARSQALAARSASLAGGRPEASMLLAEESYRTA
PTAEARGALLSTQSQPFSARLAGHRGPVNQVAFAPDDRTLATASSDGTVVLRETADGHRV
LARFTVPGRVRSVAFSTDGRTLAVTSTDGPVTLWSTTGHRRTGTLPKATKGARAVVFDPR
GGTLAVAAADGNVQLWDTGTRPRRTATLPGHEGDVNALAYAPDGRTLASAGTDRDVRLWD
TDRARVADTLEGHADEVLGVAFSPDGRTVASAGVDRTVRLWDVADGRQTDTFTGSSDDIN
DVVFTPDGTTVVGAVGDGTTRLWDVRSGRQTLVLAGHTDYVLGVAVTSDGALLATAGFDQ
SVVLWDLGGAVLTSRPFTEVWQTAYSPDGKLLATADADHTVRLWDAATHALVAALRGHTE
TVFSVAFSPDGRTLASAGSDGTVRLWDVAEHEALKKLTGHEGQVFSVAFSPDGRTLASTG
ADHTVRLWDVARRRQLGVFHGHKDFVNDVAFSPDGRTLATAGDDLTVRLWNVASHRERAT
LTGHSGAVRGVAFSPDGRTLASSGNDGSVRLWDVRHRRFETALTGHSGAVRGVDFSPDGR
TLVSSGNDRTVRLWDVAGRRVWATLTGHTNAVWGVDFAPDGRTVASSSTDGTVRLWDLDP
GARLAAICRLRLGIAPEERATLLPGVPVRAEPTECGDR
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
ttgggggacccgctgcacggacagcagacagaccctcatcacggacgggaccgggacgcg
ccgaccacgctgtccttcccggcgcaactgcgaaggctgcggcaggaacgcggactgtcg
ctcaccgacctcgcccgccgcacccactacagcaagggctacctcagcaagatcgagacc
ggtgcgaagcgccccaccgtcgacgtcgcccggctgtgcgaccaagtgctgggcgctgaa
ggggagttgctgcggctggtgcggcagacgcagccccgggacggtgaccccgcaaccgaa
gccgaccccgtcgagcggcaggccgccgagacctgtccctaccggggcctgtcggcgttc
acccccgaggacgcggagtggttcttcggccgcgagcgtgccacggccgcactcgtggag
cggatcttcgaacgggtgggcggtgggccgctgatgctcgtcgctccctccggtgccggc
aagtcgtcgctgctcagtgccggtctcgtccccgcgctcggccgcggcgatctccccatg
ccgggcgccgaccgctggccggtggtccagctcacccccaccgcgcgtcccctggacgaa
ctgctggaacgcaccgccaaagccctgggcggagacctcggtctgaccgccgaggaggtg
cgggacgacccgggcaccctgctcggcgccgtacaggccgcagccgccgccccgccggag
gcacccggagagcggcggcccccgccgccccgaccggtcctgatcgtcgaccagttcgag
gaactcttcaccctctgcacggacgaggacgaacgccgctccttcgcccgtgtgctgtcc
gccctcgccggcgcccggccgaccgcgtccgcgcacccgcccgccgtcgtggtgctcggc
gtccgcgccgacttcaccggcagctgtctgggcctgcccgagctggcccccgtcttcacc
ggcggactgttcgtgctgtccccgatgaccgtggcggaactgcgcgagtccatcacccgc
ccggcggaactcgccgggctcaccctcgaacccggcctggtcccgctgctgttgcgggac
gcgggactccgcgacgaccccgacaccggccccggggcctccggagcgggctccgacgag
acaccctccggcgccctcccgctggtctcccacgcgctgctcgccacctggcagcggcgc
cgggacagcgcgctgaccgtcgacgggtacgaacgggcgggcggcatccagggggcggtc
gcccgcaccgccgagaccgtcttcgcccggctgtatcccgccgaacagaagaccatccgc
cgcatcctgtcccggctggtgctcgtcatggacggagccggggcgacccgccgccggatg
agccgggacgccctgatggcgcggctcggcgacgccgacggggccgccgccgccctcgac
gcgttcgtccgggcccgtctcatcaccatggacagcgacaccgtcgagatcacccacgag
gcactgctgcacgcctggccccggctccgcggctggatccgcgccgaccgggccggactc
ctcctccaccagcagctctcccacgccgccggtgaatgggagcgcgagcggcgcgacccc
tccgccctctaccggggcacccgcctcgacaccgtacgggcctgggccgacgagtcggac
ggctggagcagactcgcgcccgacgaggaggcgttcctgagggccagtcaggccgaggag
gacgggcgccgcggacaggccagacgccaggtgcggctgcggcagtccctgctcgccacg
ctcgccgtgctgctcggcctcgccgtcaccgccggagggctcgcctaccagcagcgcgcg
ggcgccctcgaccaggagcgcgtcgcccgctcccaggccctcgccgcgcgctccgcgtcc
ctcgccgggggccggccggaggcgtccatgctcctcgcggaggagtcctaccgcaccgcg
cccaccgccgaagcccgcggcgccctgctcagcacccagtcacagcccttctccgcccgg
ctcgccggacaccgcggcccggtcaaccaggtcgccttcgcgcccgacgaccgcaccctc
gcgacggccagctccgacggcacggtcgtcctgcgcgagaccgccgacggccaccgcgtc
ctcgcccggttcaccgtgcccggacgcgtgcgctcggtcgccttcagcaccgacggccgt
acgctcgcggtcacgtccaccgacgggcccgtgaccctgtggagcaccaccggccatcgg
cggaccgggacgctcccgaaggccacgaagggcgcgcgggcggtcgtcttcgacccgcgc
ggagggacgctcgccgtcgccgccgccgacgggaacgtccagctgtgggacaccgggacc
cggccacggcgcaccgccaccctccccggccacgagggcgacgtcaacgcactggcctac
gcccccgacggacggacgctcgcctccgccggcaccgaccgcgacgtccggctgtgggac
accgaccgggcccgggtcgccgacacgctcgaggggcacgccgacgaagtgctgggcgtg
gcgttctcgccggacggcaggacggtggcctccgccggcgtcgaccggacggtacggctg
tgggacgtcgccgacgggcggcagaccgacacgttcacgggaagcagcgacgacatcaac
gacgtcgtcttcaccccggacgggacgacggtcgtcggcgcggtcggcgacggcacgacc
cggctgtgggacgtgcgcagcggccggcagaccctggtcctggccggacacaccgactac
gtcctcggggtggccgtcacctccgacggcgccctgctggccacggccggtttcgaccag
tccgtcgtcctgtgggacctgggcggggcggtcctgacgtcccgtccgttcacggaggtc
tggcagaccgcctacagtcccgacgggaaactgctggccaccgccgacgccgatcacacc
gtacggctgtgggacgcggcgacgcacgccctcgtggccgcgctgcgcggacacaccgag
accgtgttctcggtggccttctcgcccgacgggcggaccctggcgtcggccggctccgac
ggcacggtccggctgtgggacgtcgcggagcacgaggcactgaagaagctcaccgggcac
gaaggacaggtcttctccgtcgccttctcgcccgacgggcggaccctcgcctcgacggga
gccgaccacacggtgcgtctgtgggacgtggcgaggcgccgccagctcggcgtgttccac
ggccacaaggacttcgtcaacgatgtcgcgttcagccccgacggccgcaccctggccacc
gccggcgacgatctgaccgtgcgtctgtggaacgtcgcctcacaccgcgaacgcgccacc
ctgaccggccactcgggcgcggtgcggggggtggccttcagcccggacggccgcaccctc
gccagcagcggcaacgacgggtccgtacgcctgtgggacgtccggcaccggcgcttcgag
accgccctgaccggccactcgggcgcggtacgcggtgtggacttcagcccggacggccgc
acgctcgtcagcagcggcaacgaccgcacggtacgcctgtgggacgtcgccggacggcgg
gtgtgggcgaccctcaccggtcatacgaacgcggtgtggggcgtcgacttcgcccccgac
gggcggaccgtggccagcagcagcaccgacggcaccgtacggctgtgggacctcgacccc
ggagcccggctggcggccatctgccggctgcggctcggcatcgcacccgaggaacgcgcc
accctgctgcccggagtgcccgtacgggcggagccgacggagtgcggggaccgctga
DBGET
integrated database retrieval system
