Streptomyces scabiei: SCAB_16941
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Entry
SCAB_16941 CDS
T01187
Name
(GenBank) putative long chain fatty acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scb
Streptomyces scabiei
Pathway
scb00061
Fatty acid biosynthesis
scb00071
Fatty acid degradation
scb01100
Metabolic pathways
scb01212
Fatty acid metabolism
scb02024
Quorum sensing
scb04146
Peroxisome
Module
scb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SCAB_16941
00071 Fatty acid degradation
SCAB_16941
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SCAB_16941
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCAB_16941
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scb01004
]
SCAB_16941
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scb04147
]
SCAB_16941
Enzymes [BR:
scb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SCAB_16941
Lipid biosynthesis proteins [BR:
scb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SCAB_16941
Exosome [BR:
scb04147
]
Exosomal proteins
Exosomal proteins of breast milk
SCAB_16941
Exosomal proteins of breast cancer cells
SCAB_16941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
CBG68826
UniProt:
C9ZEP3
LinkDB
All DBs
Position
1909360..1911186
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AA seq
608 aa
AA seq
DB search
MREFTNPPLASAPPVGGLADVVFEHAQEDPDHIALGRKDERGEWCDMTSAEFRDEVLALA
KGLLAQGIRFGDRVAIMCRTRYEWTLFDYALWTVGAQVVPVYPTSSAEQVFWMLYDSQCT
AAMVEHEDHAMTIATVIDRLPQLRRLWQLDVGAVQELYESGAHLDDEVVHRHRLAVTPES
IATIIYTSGTTGRPKGCVISHANFMVEADTVIERWAPLFTSRRGDAAATLLFLPLAHVFG
RMVQVAGIRGKVKFGHQPQLNAAVLLPDLAAFQPTFFLAVPYIFEKVFNASRRKAEREGK
AGPFEKAVEVAVKYADAMEARAWGTGPGPSAGLRMQHQFFDKVVYAKIREAMGGRIKYAM
SGGSAMDRRLGLFFAGAGVHIFEGYGLTECTAAATANPPERTRYGTVGRPIPGVSVHIAD
DGEIWLRGPNVFQGYLNNPKATDETLHDGWLATGDLGSLDEDGYLTITGRKKEILVTSGG
KSVSPAILEERVRDHPLVAQCIVVGNDRPYIAALVTLDGEAVAHWLQMRGKPTPPAAELV
RDPELETEVRRAVVAANTLVSQAESIRTFRILAHQFTEEHGLLTPSLKLKRRAIEKAYAK
EVEALYRA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgaattcaccaaccccccgttggcgtcggcgccgccggtgggcggcctggccgac
gtcgtcttcgagcacgcccaggaggacccggaccacatcgcgctcggccgcaaggacgag
cggggcgagtggtgcgacatgacctccgccgagttccgcgacgaggtcctcgcgctggcg
aaggggctgctggcgcagggcatccggttcggcgaccgggtcgccatcatgtgccgcacc
cgctacgagtggaccctgttcgactacgcgctgtggaccgtcggcgcccaggtcgtcccg
gtctacccgacctcctccgccgagcaggtcttctggatgctgtacgactcccagtgcacg
gcggccatggtcgaacacgaggaccacgcgatgaccatcgccacggtcatcgaccggctg
ccccagctgcgccggctctggcagctggacgtgggcgcggtgcaggagctgtacgagtcg
ggcgcgcacctcgacgacgaggtggtgcaccggcaccgtctcgcggtcaccccggagtcg
atcgcgacgatcatctacacctccggcaccacgggccgccccaagggctgtgtcatctcg
cacgccaacttcatggtggaggcggacacggtcatcgagcgctgggctcccctgttcacc
tcccgcaggggcgacgcggcggcgacgctgctgttcctgccgctcgcccacgtcttcgga
cggatggtgcaggtcgcgggcatccgcggaaaggtcaagttcggccatcagccgcagctc
aacgcggcggtcctgctgcccgacctcgccgccttccagcccacgttcttcctcgcggtg
ccgtacatcttcgagaaggtcttcaacgcgagccggcgcaaggccgaacgcgaggggaag
gccgggccgttcgagaaggcggtcgaggtcgccgtgaagtacgcggacgcgatggaggcg
agggcctgggggaccggccccggtccctcggcggggctgcggatgcagcaccagttcttc
gacaaggtcgtctacgccaagatccgggaggcgatgggcggccggatcaagtacgcgatg
tccggcggctcggcgatggaccgccggctcggactgttcttcgcgggggccggtgtccac
atcttcgaggggtacggcctgacggagtgcacggcggccgcgaccgccaaccccccggag
cgcacccggtacggcacggtcggccggcccatcccgggcgtgagcgtgcacatcgcggac
gacggcgagatctggctgcgcggccccaatgtcttccagggctacctgaacaacccgaag
gccaccgacgagaccctgcacgacggctggctcgccaccggcgacctgggctcgctggac
gaggacggctatctcaccatcaccgggcgcaagaaggagatcctggtgacctcgggcggc
aagagcgtctcgccggcgatcctggaggagcgggtgcgtgaccacccgctggtcgcccag
tgcatcgtcgtcggcaacgaccgtccgtacatcgcggccctggtcaccctggacggggag
gcggtcgcgcactggctgcagatgcgcggcaagccgacgccgcccgcggccgagctggtg
cgcgacccggagctggagaccgaggtgcggcgggcggtggtcgccgccaacaccctggtc
tcgcaggccgagtcgatccgcaccttccgcatcctcgcgcaccagttcaccgaggagcac
gggctgctgacgccgtcgctgaagctgaagcgcagggcgatcgagaaggcgtacgcgaaa
gaggtggaggcgctgtaccgggcgtga
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