Streptomyces scabiei: SCAB_17181
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Entry
SCAB_17181 CDS
T01187
Name
(GenBank) putative sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scb03021
]
SCAB_17181
Transcription machinery [BR:
scb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCAB_17181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7343
HTH_Crp_2
HTH_24
HTH_23
MarR_2
GerE
HTH_28
MarR
HTH_3
UPF0122
KORA
HTH_15
Motif
Other DBs
NCBI-ProteinID:
CBG68850
UniProt:
C9ZER7
LinkDB
All DBs
Position
complement(1940769..1941557)
Genome browser
AA seq
262 aa
AA seq
DB search
MRTQAKHHPHDDAPDTAEDFRTLAALPPGQQRDTLRDRIIEAWLPMAERLAGRFRSRGES
YEDLRQVASLGLVKAVDRYDPELGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQDLR
NRVRFATQDLSQTISGRRPTVAEIAEHANMSEEDVRVGLEALESFTALSLDAELPGSEDG
YSLSDALGSADPALDTVVDREAVKPRLAALPERERAILYMRFFGDMTQSRIADELGISQM
HVSRLISRCCDRLRDQVMRDAS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccaggcgaagcaccacccccacgacgacgcccccgacacggccgaggacttc
cgcacactggccgctctgccgcccggtcagcagcgtgacacgctgcgtgaccggatcatc
gaggcgtggctccccatggccgaacggctcgcgggccggttccgcagccgcggcgagagc
tacgaggacctccggcaggtcgcgtcgctcggcctggtcaaggccgtcgaccgctacgac
cccgaactcggcaacgccttcgagagctatgcggtgcccaccatcaccggtgagatcaag
cggcacttccgggaccacatgtggaccctgcacgtgccgcgccgggtccaggacctgcgc
aaccgcgtgcggttcgccacccaggacctgtcccagaccatctccgggcgccggcccacc
gtggcggagatcgccgagcacgcgaacatgagcgaggaggacgtccgggtcgggctcgaa
gcgctggagagcttcacggcgctctcgctggacgcggagctgccggggagcgaggacggc
tactcgctcagcgacgcgctggggtccgccgaccccgcgctggacacggtggtggaccgg
gaggccgtcaagccgcggctggcggcgctgccggagcgggagcgggccatcctgtacatg
cggttcttcggcgacatgacccagagcaggatcgccgatgagctgggtatctcgcagatg
catgtgtcgcggctgatcagccggtgctgcgaccggctccgcgaccaggtgatgcgggac
gcctcctag
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integrated database retrieval system
