Streptomyces scabiei: SCAB_19551
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Entry
SCAB_19551 CDS
T01187
Name
(GenBank) putative secreted protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SCAB_19551
Enzymes [BR:
scb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SCAB_19551
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
CBG69076
UniProt:
C9YT62
LinkDB
All DBs
Position
2213263..2214957
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AA seq
564 aa
AA seq
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MAESPTPSEAASGPGRRAFVVGAAATAAGAALTGPLAGTARAAAFGYTDDGTHYVIDTGA
NLVFKVRKSNGDLASLAYRGTEYQGYGGMNSHIESGLGASTVTIRQSGSTILVSVAHGTL
RHYYAARSGENNIYLWTNKADASVSATRYIVRVKAGLFLNDEPDAYTYAPTTIEASDVFA
KSDGQTRSKHYSRLRVTDYDYIGWRTGSVGLWMVRSNHEKASGGPFYRSLLRHQSADGGG
LYEILYYGQNQTEDQRFGLQGPYVIAFTDGGAPSSSLFPGTLTTPWADSLGLSGYVPASG
RGRVTGVGITGRNTAYAYTVGLANAAAQYWGPARASDGWFSVTGVLPGTYTLTVFKGELA
VYTTSVTVTAGGTTALNSIAIPSSNDPSNAGAIWRINDWNGTPGGFKNAELMTYAHPSDV
RAAAWTGNVVVGSGTETSGFPCYLWKDVNSGLLVYFRLTAAQAAAAHTLRIGVTTAYANG
RPQVVVNDRWTSAIPSPPTQPNTRSLTNGSYRGNNHTFTYSVPASAWLTDTSQYNVLRIN
VVSGSGSTSYLSAGTSVDAIDLLS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatcccccaccccgtccgaggccgcgtccgggcccggccgccgcgccttcgtc
gtcggcgccgccgcgaccgccgccggggccgcgctcaccggtcccctggccggcaccgcc
cgcgccgcggccttcggctacaccgacgacggcacgcactacgtgatcgacaccggcgcg
aacctcgtgttcaaggtccgcaagagcaacggcgacctcgcctcgctcgcctaccggggc
acggagtaccagggctacggcggcatgaactcgcacatcgagtccggcctcggcgcctcc
accgtcaccattaggcagtccggctcgacgatcctcgtctccgtcgcccacggcacgctt
cggcactactacgcggcccgcagcggcgagaacaacatctacctgtggaccaacaaggcc
gacgcctcggtctcggcgacccgctacatcgtgcgtgtgaaggcgggcctcttcctcaac
gacgagcccgacgcgtacacctacgcgcccaccaccatcgaggcgtcggacgtcttcgcc
aagtccgacggccagacccgttccaagcactactccagactgcgggtgacggactacgac
tacatcggctggaggaccggctcggtcggcctgtggatggtccgcagcaaccacgagaag
gcctccggcggccccttctaccgctccctgctgcgccaccagagcgcggacggcggcggg
ctctacgagatcctgtactacggccagaaccagaccgaggaccagcggttcggcctccag
gggccctacgtcatcgccttcacggacggcggggcgccctcctcgtcgctgttcccgggc
acgctgaccaccccgtgggcggactcgctcggcctgtccggatacgtccccgcgagcggc
cggggccgggtcacgggcgtcggcatcaccggccggaacacggcgtacgcgtacacggtc
gggctcgccaacgcggcggcccagtactggggtccggcccgggcgtcggacggctggttc
tccgtgacgggggtgttgccggggacgtacacgctgacggtcttcaagggcgaactggcg
gtgtacaccacctcggtgacggtcaccgcgggcgggacgacggcactgaactcgatcgcg
atcccgtcctcgaacgacccgtccaacgcgggcgcgatctggcggatcaacgactggaac
ggcaccccgggcggcttcaagaacgccgagctgatgacgtacgcgcatccgtcggacgtc
cgggccgccgcctggaccggcaatgtggtcgtcggcagcggtaccgagacctcgggcttc
ccctgctacctctggaaggacgtgaacagtggtctcctcgtgtacttcaggctgaccgcc
gcgcaggccgccgccgcccacaccctgcgcatcggggtgacgacggcctacgccaacggc
cggccgcaggtcgtcgtcaacgaccggtggacctcggcgatcccctctccgcccacccag
ccgaacacccggtcactgacgaacgggtcctaccggggcaacaaccacacgttcacctac
agcgtgcccgcgtcggcctggctgaccgacacgagtcagtacaacgtgctgcggatcaac
gtggtgagcggatcggggtcgacgtcctatctcagcgcggggacgtcggtcgacgcgatc
gacctcctgagctga
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