Streptomyces scabiei: SCAB_19991
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Entry
SCAB_19991 CDS
T01187
Name
(GenBank) putative DNA exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scb
Streptomyces scabiei
Pathway
scb03030
DNA replication
scb03430
Mismatch repair
scb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCAB_19991
03430 Mismatch repair
SCAB_19991
03440 Homologous recombination
SCAB_19991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scb03032
]
SCAB_19991
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_19991
Enzymes [BR:
scb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCAB_19991
DNA replication proteins [BR:
scb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCAB_19991
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCAB_19991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CBG69116
UniProt:
C9YUL6
LinkDB
All DBs
Position
complement(2266061..2266780)
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AA seq
239 aa
AA seq
DB search
MGWHRQLLIGFDLETTGTDPREARIVTGAVIEVRDGERIGHREWLADPGVEIPEEAVAVH
GITNARAVAEGRPADRVADAIADVLVSYWRTGVPVVAYNAAFDLSLLSAELRRHALPSLR
DRLGTDPAPVIDPYTIDRSVDRYRRGKRNLEAVCGEYGVALDSAHDASADALAAARLARA
IAERHPKVAALGPAELHRRQIEWYAEWAADFQAFLRRKGDPEAVVDATWPLRELEDETV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgggttggcaccggcaactgctgatcggcttcgacctggagaccaccgggacggacccg
cgcgaggcgcggatcgtcacgggcgcggtgatcgaggtcagggacggggagcggatcgga
caccgggaatggctggccgacccgggcgtggagatcccggaggaggcggtggcggtccac
ggcatcaccaacgcccgcgcggtggccgagggcagacccgccgaccgggtcgccgacgcc
atcgccgacgtcctcgtctcctactggcgcacgggcgtcccggtcgtggcgtacaacgcg
gccttcgacctgagcctgctctccgccgagctgcgccggcacgccctgccgtccctgcgc
gaccggctcggcacggacccggcgccggtcatcgacccgtacacgatcgaccgctccgtc
gaccgctaccgccggggcaagcgcaacctcgaagcggtctgcggggagtacggcgtggcg
ctggacagcgcgcacgacgcctccgccgacgccctggccgccgcccggctcgcccgcgcg
atagccgagcgccacccgaaggtcgccgccctcggcccggcggaactgcaccgccgccag
atcgagtggtacgccgagtgggccgccgacttccaggcgttcctgcgccgcaagggcgac
cccgaggcggtcgtggacgcgacctggccgctgcgcgaactggaggacgagacggtatga
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