Streptomyces scabiei: SCAB_20121
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Entry
SCAB_20121 CDS
T01187
Symbol
geoA
Name
(GenBank) putative germacradienol synthase
KO
K10187
germacradienol/geosmin synthase [EC:
4.2.3.22
4.2.3.75
4.1.99.16
]
Organism
scb
Streptomyces scabiei
Pathway
scb00909
Sesquiterpenoid and triterpenoid biosynthesis
scb01100
Metabolic pathways
scb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
SCAB_20121 (geoA)
Enzymes [BR:
scb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.16 geosmin synthase
SCAB_20121 (geoA)
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.22 germacradienol synthase
SCAB_20121 (geoA)
4.2.3.75 (-)-germacrene D synthase
SCAB_20121 (geoA)
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Gene cluster
GFIT
Motif
Pfam:
Terpene_syn_C_2
Terpene_synth_C
Motif
Other DBs
NCBI-ProteinID:
CBG69128
UniProt:
C9YUM8
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All DBs
Position
complement(2282242..2284449)
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AA seq
735 aa
AA seq
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MTQPFALPHFYLPYPARLNPHLEEARAHSSVWAREMGMLEGSGVWNQADLDAHDYGLLCA
YTHPDCDGPALSLITDWYVWVFFFDDHFLELYKRSQDRPGGKAHLDRLPLFMPLDLSTPV
PEPRNPVEAGLADLWARTVPSMSMDWRRRFAVATEHLLNESMWELSNINEGRIANPVEYI
EMRRKVGGAPWSAGLVEYATAEVPESVADTRPLRVLMETFSDAVHLRNDLFSYQREVEEE
GENSNGVLVLETFFGCGTQQAAETVNDILTSRLHQFEDTALTEVPAIAVEKGLTPGEVAA
VAAYTKGLQDWQSGGHEWHMRSSRYMNEGATSARGPLDLGGAVLSGPALVTRAGHGTSAA
DVGALLATAAAQRLRAHTHQPYQKVGPSLLPDFHMPFRVALCPHLDGARPRLTAWAHAMG
ILSEGVWDEERLAAADLPLCSAGLDPDATPEQLDLSSAWLAWGTYGDDYYPLVFGHRRDL
AAARLTTARLSDCMPLDGERAPLPSNAMERALVDLWTRTTAAMTPDERRGLKESVDKMTE
SWVWEVFNQIHHRVPDPVDYLEMRRATFGSDLTLSMCRMGHGPQIPPEVYRSGPVRSLEN
AAIDYGCLINDVFSYQKEIEYEGEVHNAILVVQNFFGCDYPAALGVVHDLMTQRMRQFEH
VVAHELPVVYDDFRLSREARDIMGGYVTDLQNWMAGILNWHRNVDRYKPEFLARRAHNFV
PDRPPTLSLTPLRTG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagccgttcgcactcccgcacttctacctgccgtatcccgcgcggctgaacccc
cacctcgaagaggcccgtgcccattcctccgtgtgggcgcgggagatgggcatgctggag
ggctccggcgtatggaaccaggcggacctggacgcgcacgactacggactgctgtgcgcg
tacacccatcccgactgcgacgggccggcgctctcgctcatcaccgactggtacgtgtgg
gtgttcttcttcgacgaccacttcctggagctctacaagcgctcccaggaccgccccggc
ggcaaggcccacctcgaccggctcccgctgttcatgccgctggacctctccacccccgta
cccgagccgcggaacccggtggaggcgggcctcgccgacctctgggcccgtacggtgccg
tcgatgtcgatggactggcgccgccgtttcgccgtggcgaccgagcacctgctcaacgag
tcgatgtgggagctgtccaacatcaacgagggccggatcgccaacccggtcgagtacatc
gagatgcgccgcaaggtcggcggcgccccctggtcggccggcctcgtcgagtacgcgacc
gccgaggtgccggagtccgtcgcggacacgcggccgctgagggtcctgatggagacgttc
tccgacgccgtccacctgcgcaacgacctgttctcctaccagcgcgaggtcgaggaggag
ggcgagaacagcaacggcgtgctcgtcctggagaccttcttcggctgcggcacccagcag
gccgccgagaccgtcaacgacatcctcacctcccggctgcaccagttcgaggacaccgcg
ctcaccgaggtccccgcgatcgccgtggagaagggcctcacaccgggcgaggtcgccgcc
gtcgccgcctacaccaagggtctgcaggactggcagtccggcggccacgagtggcacatg
cgctccagccgctacatgaacgagggcgccacgtccgcgcgcggccccctcgacctcggc
ggcgcggtcctctccggccccgccctggtcacccgggccgggcacggcacgtccgccgcg
gacgtgggcgcgctgctcgcgaccgccgccgcgcagcggctgcgggcccacacgcatcag
ccctaccagaaggtcggcccctcgctcctgcccgacttccacatgccgttccgggtcgcg
ctctgtccccacctggacggcgcccgcccccgcctcaccgcctgggcgcacgcgatgggc
atcctgtcggagggcgtctgggacgaggaacggctcgccgccgccgacctgccgctctgc
tcggccggcctcgacccggacgccacccccgagcagctcgacctcagctccgcgtggctg
gcctggggcacctacggcgacgactactaccccctggtcttcggtcaccgccgcgacctc
gccgccgcacgcctgaccacggcccggctctccgactgcatgcccctcgacggcgagcgg
gccccgctcccgtcgaacgccatggaacgggccctcgtcgacctctggacgcggacgacg
gcggcgatgacccccgacgagcgccgcggtctgaaggagtccgtcgacaagatgaccgag
agctgggtgtgggaggtgttcaaccagatccaccaccgcgtccccgacccggtggactac
ctggagatgcgccgcgccaccttcggctccgacctcactctcagcatgtgccggatgggc
cacggcccgcagattccgccggaggtctaccgcagcggccccgtccgctcgctggagaac
gcggccatcgactacgggtgcctcatcaacgacgtgttctcgtaccagaaggagatcgag
tacgagggcgaggtgcacaacgcgatcctcgtggtgcagaacttcttcggctgcgactac
ccggccgcgctcggtgtggtccacgatctgatgacccagcggatgcggcagttcgaacat
gtcgtcgcccatgaactccctgtcgtctacgacgacttccggctctcccgggaggcgcgg
gacatcatgggcggctatgtgaccgacctgcagaactggatggccggcatcctcaactgg
caccggaacgtggaccgctacaagccggagttcctggcccgccgcgcccacaacttcgtc
ccggaccggccgccgacgctgtccctcacacccctgcgcacgggctga
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