Streptomyces scabiei: SCAB_20891
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Entry
SCAB_20891 CDS
T01187
Name
(GenBank) putative exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scb03016
]
SCAB_20891
Enzymes [BR:
scb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SCAB_20891
Transfer RNA biogenesis [BR:
scb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SCAB_20891
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
CBG69204
UniProt:
C9YVW5
LinkDB
All DBs
Position
2363523..2364716
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AA seq
397 aa
AA seq
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MLEPREGIPAVIADEDSLAAVIAAFAAGTGPVAVDAERASGYRYGQRAYLVQLRREGAGT
ALIDPVACPDLSGLGEALSGVEWVLHAATQDLPCLREIDMVPTRIFDTELAGRLAGFPRV
GLGAMVEGVLGYVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKL
EWARQEFDAIASAPPAEPRKDPWRRTSGMHKVRRRRQMAVVREMWEARDRIAQRRDVSPG
KVLSDAAIVEASLALPVNATALAALNGFGHRMGRRQLEQWQAAVDRARALPDSALPAHGQ
PVTGPPPPKAWADKDPAAAARLSAARAGVSALAEQLNMPQENLITPDTVRRLCWEPPRSL
DAEAVSAVLAGHGARAWQVELVTPVLVGAMSAVAKDA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttgctggagccccgggagggcattccggccgtcatcgcggacgaggactcgctcgccgcg
gtgatcgccgccttcgccgccggcaccggccccgtcgccgtggacgccgaacgcgcgtcc
ggttaccgctacggtcagcgcgcctatctggtgcagttgcgccgcgagggcgcgggcacc
gcgctcatcgaccccgtggcctgccccgacctctccggcctcggcgaggcgctctccggc
gtggagtgggtgctccacgcggccacccaggacctgccgtgtctgcgcgagatagacatg
gtcccgacgcggatcttcgacaccgagctggccgggcggctcgccggcttcccccgggtc
ggcctcggcgcgatggtcgagggcgtcctcggctacgtcctggagaagggccactccgcc
gtcgactggtcgacccgtccgctgcccgagccgtggctgcgctacgccgcgctcgacgtg
gaactcctcgtggacctgcgggacgccctggagaaggagctggaccggcaggggaagctg
gagtgggcccgccaggagttcgacgcgatcgcctccgcgccgcccgcggaaccccgcaag
gacccgtggcggcgtacgtccgggatgcacaaggtgcgccggcggcggcagatggcggtc
gtgcgggagatgtgggaggcgcgggaccggatcgcgcagcgccgggacgtctcccccggc
aaggtgctgagcgacgcggcgatcgtcgaggcgtccctggccctgccggtgaacgccacc
gcactggccgcgctgaacggcttcgggcaccggatgggccggcgtcagctggagcagtgg
caggcggcggtcgaccgggccagggcgctgccggactcggcgctgccggcgcacgggcag
cccgtgaccgggccgcccccgccgaaggcgtgggccgacaaggatcccgcggcggcggcc
cgactgtccgccgcgcgggccggggtgtccgcgctggccgagcagctcaacatgccgcag
gagaacctgatcaccccggacacggtccggcggctgtgctgggaaccgccgaggtcgctg
gacgcggaggcggtgagcgcggtgctcgcgggccacggggcgcgggcctggcaggtggaa
ctggtgacgccggtgctggtgggcgcgatgtccgcggtggcgaaggacgcatag
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