Streptomyces scabiei: SCAB_21231
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Entry
SCAB_21231 CDS
T01187
Name
(GenBank) putative helicase SNF2 family protein
Organism
scb
Streptomyces scabiei
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HPS3_C
RctB_central
Motif
Other DBs
NCBI-ProteinID:
CBG69237
UniProt:
C9YVZ8
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Position
2416412..2419375
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AA seq
987 aa
AA seq
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MSAGYAPGAQVLIRDELWLVRKVTNTRHDGWMVEVTGVSSFVRGTDAVFYDRLDDIQVLD
PRETQLVADDSSNHRRARLFLEAVMRKTYLPQTEHGLALSDGFLMDQQVHQLRPAELALS
MKNPQPRILIADVVGLGKTLEIGVLLAELIRRGRGERILVVTPQHVLEQFQRELWTRFAI
PLVRLDSTGIQRVQQEIPAGRNPFAYFKRAIISVDTLKSDVYAHHLEHTDWDAVVIDESH
NLVNRGTKNNALARLLAQKTDALVLASATPHNGDAASFAELIKMLDEAAIADPSKYEVKD
LEHLYIRRTKTTAEVRDGLKGAWADRGPSQPLHVPAGEKELAVFKELASRWIPADPSVPS
ASTYPLVPYQLLKSFLSSHRALLETIKTRLTNLDKPPAEKPTTNTKRKTRPVDPAAREAA
RKAERAALVELQALAEQIRDDDSAKLAALLKELRALGVGPGSDTRVVVFSERIPTLKWLA
ETVPAALGFPRGTTADPSKPWLDFGGAVQVMHGDATTDEEQTDIVEKFGLRDDPVRILFT
GDVASEGVNLHQQCHLLIHYDLPWSLIRIEQRNGRIDRYGQEHQPQFRALILTNDVPWRT
DEVTGQPRTLDDRLVGEKLLKREEQAHKIEGSAEAVTGLYRAQEEENRLTQDLIAGRTVE
DSIKQSQQSGAAFLTGLLGQVGAVPEHPEVPRAAVPKLFRSTADYFDEALRQICHPNPED
QLSLLRYDDGTIAFEPPRDLLYRLKSLPKSYLDEQRILPRKNEKGRMRITFSKTLASARL
KAARDSSKSQWPNVSYVTDVHPVLDWLTDKVLVQVGRHQAPVLAAAVDRPVFLVQGIYSN
AVGRPTVVEWMAVTGLPDAPEIKPLTAQLLEDYGVGPNMPGRATPRDLPGLTDLVPAAID
EAERFLKSREEDYQFQIDKTLAPYRKRVTYWKQEALFAGTRRDKQEVDLAASRRLSLVKS
LETAGKPMLRLLAVLEPHAATAGDTAR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggccggctacgcaccaggggctcaggtactgatccgcgacgaactgtggctggta
cgcaaggtcaccaacacccggcatgacgggtggatggtcgaagtcaccggcgtctcttca
ttcgtccgcggcaccgacgccgtgttctatgaccggctggacgacatccaggtactcgat
ccccgcgagacgcagctggtggccgacgactcgtccaaccatcgacgcgcccgcttgttc
ctcgaagcggtgatgcgcaagacgtatctgccgcagaccgaacacggcctggccctgtcc
gacggctttctgatggaccagcaggtccatcagctgcggccggcggagttggcgctgtcc
atgaagaacccgcagccccgcatcctgatcgcggacgtggtgggtctcggtaagaccctg
gagatcggggtgctgctggccgagctcatccggcgcgggcgcggtgagcggatcctggtg
gtcaccccgcaacatgtgctggaacagttccagcgtgagctgtggacccggttcgcgatc
cccctcgtgcgactggattcgaccggcatccagcgggtgcagcaggagatcccggccggg
cgcaatccgttcgcctatttcaagcgcgcgatcatctccgtggacacgctgaaaagtgat
gtctacgcccatcatctagaacacaccgactgggatgcggtcgtcatcgacgaatcacac
aacctggtcaatcgaggcacaaagaacaatgcgctggcccggctgctggcgcagaagacc
gacgccctcgtcctcgcctcagccacgccgcacaacggtgacgctgcctcgttcgccgag
ctgatcaagatgctggacgaggccgcgatcgccgatccgtccaagtacgaggtgaaggat
ctcgagcacctttacatccggcgtacgaagacgactgctgaggtacgcgacgggcttaag
ggcgcgtgggcggaccgtggcccctcgcagcccctgcacgtgccggccggggagaaggag
ctcgcggtcttcaaggagctggcttcacgctggatccccgccgacccttcggtgccgtcc
gcgagtacgtatccactcgtcccctaccaactgctgaaatcgttcctgtcctcgcaccgg
gccctgctggaaacgatcaagacccgcctgacgaacctggacaagccgccggccgagaag
ccgaccaccaacaccaagcgcaagacgcgcccggtcgaccccgcagcccgcgaagcagcc
cgcaaggcggagcgagccgctctggtcgagctgcaggccctcgccgagcagatccgggac
gacgactcggcgaaactcgccgcgctgctgaaggaactgcgcgcgctgggtgtcggaccc
ggctcggacacccgggtcgtggtgttctccgaacgcatcccgacccttaagtggctggca
gagacggtgccggcggctctgggctttccccgcggcaccactgcggacccgagcaagccc
tggctggacttcgggggagcagtgcaggtcatgcacggcgatgccaccaccgacgaggaa
cagaccgacatcgtcgagaagttcgggctgcgcgatgacccggtgcgcatcctgttcacc
ggtgacgtcgcctcggaaggcgtcaacctgcaccagcagtgccacctgctgatccattac
gaccttccgtggtccctgatccgcatcgagcagcgcaacggccgtatcgaccgctacgga
caggaacaccagccccagttccgggcgctgatcctcaccaacgacgtcccgtggcgcacc
gacgaagtcaccggccagccgcgcacgctggatgaccgtctggtcggcgagaagctcctg
aagcgcgaggagcaagcacacaagatcgaaggatcagccgaggcagtcactggcctgtac
cgggcccaggaggaggagaaccgcctcactcaggacctgatcgccggccgtaccgtcgag
gactcgatcaagcagtcccagcaaagtggtgctgccttcctgacgggcctcctgggccag
gtcggtgccgtgcccgagcaccccgaagtgccccgcgcagcggtccccaagctcttccgg
tccacggccgactacttcgacgaggcactgcggcagatctgccatcccaatcccgaggat
cagttgtcgctgctgcgctacgacgacggcacgatcgccttcgagcccccgcgcgacctg
ctgtaccggctgaagtcgctgcccaagtcctacctggacgagcagcggatcctgccgcgc
aagaacgaaaagggccggatgcgcatcaccttctccaagacgctcgccagtgcgcggctg
aaggccgctcgggactcctccaagtcgcagtggcccaacgtgtcctacgtgaccgatgtg
cacccggtgctggactggctcaccgacaaggtgctcgtgcaggtcggccgccaccaggca
ccggtgctcgcagccgccgtggaccgcccggtcttcctggtccagggcatctactccaac
gcggtgggccgccccaccgtcgtcgagtggatggccgtcaccggcctccccgacgccccc
gagatcaagccgctgaccgcacagctgctggaagactatggcgtcggcccgaacatgccg
ggccgcgccactccgcgtgacctgccggggctcaccgacctcgtgcctgccgccatcgac
gaggccgagcgcttcctcaagagcagggaagaggactaccagttccagatcgataagacg
ctcgctccttaccgcaagcgtgtcacctactggaaacaggaagccctcttcgccggcaca
cgccgcgacaagcaggaagtcgacctggccgccagccgccgcctgagcctggtcaagtcc
ctggaaacggcgggcaaaccgatgcttcgtctgctggccgtcctggaaccgcacgccgcc
accgcaggggacaccgcacgatga
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