KEGG   Streptomyces scabiei: SCAB_24631
Entry
SCAB_24631        CDS       T01187                                 
Symbol
nrdJ
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
scb  Streptomyces scabiei
Pathway
scb00230  Purine metabolism
scb00240  Pyrimidine metabolism
scb01100  Metabolic pathways
scb01232  Nucleotide metabolism
Module
scb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:scb00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SCAB_24631 (nrdJ)
   00240 Pyrimidine metabolism
    SCAB_24631 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scb03400]
    SCAB_24631 (nrdJ)
Enzymes [BR:scb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SCAB_24631 (nrdJ)
DNA repair and recombination proteins [BR:scb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SCAB_24631 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N Ribonuc_red_lgN RuvA_C ATG101
Other DBs
NCBI-ProteinID: CBG69573
UniProt: C9Z0M0
LinkDB
Position
complement(2785589..2788486)
AA seq 965 aa
MTETASGPARSSRAKGTKASKGLRIERIHTTPGVHPYDEVIWERRDVVMTNWRDGSVNFE
QRGVEFPDFWSVNAVNIVTSKYFRGAVGTPQRETGLKQLIDRIVKTYTKAGEDNRYFASP
ADAEIFEHELAYALLHQVFSFNSPVWFNVGTPQPQQVSACFILSVDDSMESILDWYKEEG
MIFKGGSGAGLNLSRIRSSKELLSSGGNASGPVSFMRGADASAGTIKSGGATRRAAKMVV
LDVDHPDVEDFIATKVKEEEKIRALRDAGFDMDLGGDDITSVQYQNANNSVRVNDEFMTA
VENGTEFGLRARMTGEVIEKVDAKALFRKLAEAAWACADPGIQYDGVINNWHTCPESGRI
TASNPCSEYMHLDNTSCNLASLNLMKFLKDDGLGRQSFEVERFAKVVELVITAMDISICF
ADFPTQKIGENTRAFRQLGIGYANLGALLMATGHAYDSEGGRALAGAITSLMTGTAYKRS
AELAAVVGPYDGYARNADAHNRVMKQHSDANGTAVRMDDLDSPVWAAATEAWQDVLRLGE
KNGFRNSQASVLAPTGTIGLAMSCDTTGVEPDLALVKFKKLVGGGSMQIVNGTVPQALRR
LGYQEEQIEAIVAHIADHGNVIDAPGLKQEHYEVFDCAMGERAISPMGHVRMMAAIQPWI
SGAISKTVNMPETATVEEVEEIYFEAWKLGVKALAIYRDNCKVGQPLSAKTKESEKAEIT
EKAEETIRATVEKVVEYRPVRKRLPKGRPGITTSFTVGGAEGYMIANSYPDDGLGEVFLK
MSKQGSTLAGMMDAFSIAVSVGLQYGVPLETYVSKFTNMRFEPAGMTDDPDVRMAASIVD
YIFRRLALDFLPFETRSALGIHSADERQRHLETGSYEPILDDVEVDVEGLSQSAPRQSLK
AVSAPKADEEGAKPAPKQAHTSAELVEMQLGIQADAPLCFSCGTKMQRAGSCYICEGCGS
TSGCS
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgacagagacggcgagcggtccggcacggagttcccgcgccaagggcaccaaggcgagc
aagggcctgcgtatcgagcgcatccacaccactcccggcgtgcacccgtacgacgaggtg
atctgggagcggcgtgacgtcgtcatgaccaactggcgcgacggctcggtcaacttcgag
cagcgtggcgtcgagttccccgacttctggtcggtgaacgcggtcaacatcgtcaccagc
aagtacttccgcggtgccgtgggcaccccgcagcgcgagaccggcctgaagcagctgatc
gaccgcatcgtgaagacctacacgaaggccggtgaggacaacaggtacttcgcctcgccc
gccgacgccgagatcttcgagcacgaactggcgtacgccctcctgcaccaggtcttcagc
ttcaacagccccgtctggttcaacgtgggcaccccgcagcctcagcaggtctccgcctgc
ttcatcctgtccgtcgacgactccatggagtcgatcctcgactggtacaaggaagagggc
atgatcttcaagggcggctccggcgccggcctgaacctctcccgcatccgctcctccaag
gagctgctctcctccggcggcaacgcctccggtccggtctccttcatgcggggcgccgac
gcctccgccggaacgatcaagtcgggcggcgccacccgccgcgcggccaagatggtcgtc
ctcgacgtggaccacccggatgtcgaggacttcatcgccaccaaggtgaaggaagaggag
aagatccgcgccctgcgcgacgcgggcttcgacatggacctgggcggcgacgacatcacg
tccgtccagtaccagaacgccaacaactcggtccgcgtgaacgacgagttcatgacggcc
gtggagaacggcaccgagttcggcctgcgcgcccgtatgaccggcgaggtcatcgagaag
gtcgacgccaaggcgctgttccgcaagctggccgaggccgcgtgggcctgtgccgacccg
ggcatccagtacgacggtgtgatcaacaactggcacacctgccccgagtccggccgcatc
accgcgtccaacccgtgcagcgagtacatgcacctggacaacacgtcctgcaacctcgcc
tcgctgaacctgatgaagttcctcaaggacgacggcctcggccgccagtccttcgaggtc
gagcgcttcgccaaggtcgtcgagctcgtcatcaccgcgatggacatctccatctgcttc
gccgacttcccgacccagaagatcggcgagaacacccgcgccttccgtcagctcggcatc
ggttacgccaacctcggcgccctgctcatggcgacgggtcacgcgtacgactccgaaggc
ggccgcgccctcgccggcgccatcacctccctgatgaccggcaccgcgtacaagcgttcg
gcggaactcgccgcggtcgtcggcccgtacgacggctacgcccggaacgccgacgcccac
aaccgcgtcatgaagcagcactccgacgccaacggcacggccgtgcgcatggacgacctg
gacagcccggtctgggccgccgccaccgaggcatggcaggacgtcctgcgcctcggtgag
aagaacggcttccgcaactcgcaggcctccgtgctcgcgcccaccggcacgatcgggctg
gccatgtcctgcgacaccaccggtgtcgagccggacctggcgctggtcaagttcaagaag
ctggtcggcggcggctcgatgcagatcgtcaacggcacggtcccgcaggccctgcgccgc
ctgggctaccaggaggagcagatcgaggcgatcgtcgcccacatcgccgaccacggcaat
gtgatcgacgccccgggcctcaagcaggagcactacgaggtcttcgactgcgccatgggc
gagcgcgccatctccccgatgggccacgtccgcatgatggccgcgatccagccgtggatc
tccggcgccatctccaagacggtcaacatgccggagacggcgaccgtcgaggaggtcgag
gagatctacttcgaggcctggaagctgggcgtcaaggcgctcgcgatctaccgcgacaac
tgcaaggtcggccagccgctctccgccaagaccaaggagtcggagaaggccgagatcacc
gagaaggccgaggagacgatccgggccacggtcgagaaggtcgtcgagtaccgcccggtt
cgcaagcgtctcccgaagggccgccccggcatcaccacgtccttcaccgtcggcggtgcc
gagggctacatgatcgccaactcctacccggacgacggcctgggcgaggtcttcctgaag
atgtccaagcagggctcgaccctcgcgggcatgatggacgccttctcgatcgccgtctcg
gtcggtctgcagtacggcgtgccgctggagacgtacgtctcgaagttcaccaacatgcgc
ttcgagccggccggtatgacggacgacccggacgtgcggatggcggcgtcgatcgtcgac
tacatcttccgccgcctggcgctggacttcctgcccttcgagacgcgctccgcactcggg
atccactccgccgacgagcgtcagcgtcacctggagaccggttcgtacgagccgatcctg
gacgacgtggaggtggacgtcgagggtctgtcccagtcggcgccgcgacagtccctgaag
gcagtctccgctccgaaggccgacgaggagggcgccaagcccgccccgaagcaggcccac
accagcgccgagctggtggagatgcagctgggcatccaggccgacgccccgctgtgcttc
tcctgcggtacgaagatgcagcgcgccggctcctgctacatctgcgagggctgcggctcg
acgagcggctgcagctga

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