Streptomyces scabiei: SCAB_25101
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Entry
SCAB_25101 CDS
T01187
Name
(GenBank) putative radical SAM protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scb03009
]
SCAB_25101
Enzymes [BR:
scb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SCAB_25101
Ribosome biogenesis [BR:
scb03009
]
Prokaryotic type
ribosomal protein modification factors
SCAB_25101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
CBG69617
UniProt:
C9Z225
LinkDB
All DBs
Position
complement(2839188..2840615)
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AA seq
475 aa
AA seq
DB search
MDSEELAGRLEADGWELVEDAEEADVAVVNTCGFVEAAKKDSVDALLEANDLKGHGRTQA
VVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTILNGGIHASHTPRDRRKLLP
ISPAQRQESAAEVALPGHAPVDLPEGLAPASGPRSPLRRRLDGSPVASVKLASGCDRRCS
FCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEVMLVSENNTSYGKDLGDIRLLESLLPE
LAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYFDLSFQHSAPAVLRSMRRFGDTD
RFLELLDTIRGKAPEAGVRSNFIVGFPGESEDDLAELERFLNGARLDAIGVFGYSDEDGT
EAATYENKLPEDVVAERLARVSRLAEELVSQRAEERVGQTVRVLVESVDGEEGAYGRAAH
QAPETDGQVLFTSGEELSVGLMVEAKVVGTEGVDLVAEVLPGSHGSHACTEEAAR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtggactcggaggagctcgcaggccgcttggaggcggacggctgggagctcgtcgaggac
gccgaggaagcggacgtcgccgtcgtcaacacctgtggcttcgtcgaagccgccaagaag
gactccgtcgacgcgctcctggaggccaacgacctcaagggccacggcagaacccaggcc
gtcgtggcggtcggctgcatggccgagcggtacggcaaggagctggccgaggcgctgccc
gaggccgacggcgtgctcggcttcgacgactacgcggacatctccgaccgcctccagacc
atcctgaacggcggcatccacgcctcgcacaccccgcgggaccgccgcaagctgttgccg
atcagcccggcccagcgccaggagtcggcggccgaggtcgcgctcccgggccacgccccg
gtcgatcttccggaagggctcgctccggcttccgggccgcgttcgccgctgcgccgccgc
ctggacggctcgcccgtggcctccgtgaagctcgcctccggctgcgaccgccgctgctcc
ttctgcgccatcccctccttccgcggctccttcatctcccgccgcccctccgacgtcctg
aacgagacccgctggctggccgagcagggcgtcaaggaggtcatgctggtctccgagaac
aacacctcgtacggcaaggacctgggcgacatccggctgctggagtccctgctgcccgag
ctggccgaggtcgacggcatcgagcgggtgcgcgtcagctacctccagcccgccgagatg
cggcccggcctcatcgacgtgctcacctccacacccaaggtcgtgccctacttcgacctc
tccttccagcactccgccccggccgtgctgcgctccatgcgccgcttcggcgacaccgac
cgcttcctggaactgctcgacaccatccgcggcaaggcacccgaagccggcgtgcggtcc
aacttcatcgtcggcttccccggcgagagcgaggacgacctcgccgagctggagcgcttc
ctgaacggcgcgagactggacgcgatcggtgtcttcggctactccgacgaggacggcacg
gaagcggcgacgtacgagaacaagctgcccgaggacgtcgtggccgagcggctcgcacgg
gtctcgcggctggccgaggaactggtctcgcagcgtgccgaggagcgcgtcggacagacc
gtgcgcgtgctggtcgagtccgtcgacggcgaggagggcgcgtacggccgggccgcccac
caggcacccgagaccgacggtcaggtgctcttcacgagcggcgaggaactgagcgtcggc
cttatggtcgaggcgaaggtggtcggcacggaaggcgtcgatctggtggccgaggtgctt
ccgggctcgcacggctcccacgcgtgtactgaggaggcggccagatga
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