Streptomyces scabiei: SCAB_26051
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Entry
SCAB_26051 CDS
T01187
Symbol
whiG
Name
(GenBank) sporulation-specific sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
scb
Streptomyces scabiei
Pathway
scb02020
Two-component system
scb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCAB_26051 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCAB_26051 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scb03021
]
SCAB_26051 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scb02035
]
SCAB_26051 (whiG)
Transcription machinery [BR:
scb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCAB_26051 (whiG)
Bacterial motility proteins [BR:
scb02035
]
Flagellar system
Flagellar assembly proteins
Stator
SCAB_26051 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
CBG69709
UniProt:
C9Z3P3
LinkDB
All DBs
Position
complement(2969115..2969891)
Genome browser
AA seq
258 aa
AA seq
DB search
MRPPAPSTLDELWRTYKTSGDERLREQLILHYSPLVKYVAGRVSVGLPANVEQADFVSSG
VFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRALDWIPRSVRQKARNVERAYATLE
SRLRRTPSEGEVAAEMGIAVDELHAVFSQLSLANVVALEELLHAGGEGGDRLSLMDTLED
TAADDPVEVAEDRELRRFLARAINTLPEREKTVVTLYYYEGLTLAEIGNVLGVTESRVSQ
IHTKSVLQLRAKLASFGR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcccgcccgccccctcgacactcgacgagctgtggcggacgtacaagacgagcggc
gacgagcggctgcgcgagcagttgatcctgcactattcgccgctggtgaagtacgtcgcg
ggacgggtgagcgtcgggctgccggccaacgtcgagcaggccgacttcgtctcctcgggg
gtcttcgggctcatcgacgcgatcgagaagttcgacatcgaccgggagatcaagttcgag
acgtacgcgatcacccggatccggggcgccatgatcgacgagctgcgtgcgctggactgg
atcccccggtcggtacggcagaaggcgcgcaacgtcgagcgggcctacgccacgctggag
tcccggctcagacgcaccccgagcgagggggaggtcgccgccgagatggggatcgcggtc
gacgaactgcacgcggtgttcagccagttgtcgctggccaacgtggtggcgctggaggag
ctgctgcatgccgggggcgagggcggtgaccggctgagcctgatggacacgctggaggac
accgccgcggacgacccggtcgaggtcgccgaggaccgcgagctgcgccgcttcctggca
cgggccatcaacacgctgcctgagcgggagaagaccgtcgtcacgctgtactactacgag
ggcctcaccctcgccgagatcggcaacgtactgggggtcaccgagagccgggtgagccag
atccacacgaagtcggtgctgcagctgagggcgaagctggcgagtttcggccgttga
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