Streptomyces scabiei: SCAB_26231
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Entry
SCAB_26231 CDS
T01187
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
scb
Streptomyces scabiei
Pathway
scb02024
Quorum sensing
scb03060
Protein export
scb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SCAB_26231 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCAB_26231 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCAB_26231 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scb02044
]
SCAB_26231 (ffh)
Enzymes [BR:
scb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SCAB_26231 (ffh)
Secretion system [BR:
scb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SCAB_26231 (ffh)
Eukaryotic Sec-SRP protein
SCAB_26231 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
nSTAND3
cobW
APS_kinase
MMR_HSR1
ArsA_ATPase
MeaB
AAA_18
AAA_30
AAA_31
NPHP3_N
AAA_33
MobB
Thymidylate_kin
TsaE
AAA_24
Mei5
AAA_16
ATP_bind_1
6PF2K
DUF1512_C
Motif
Other DBs
NCBI-ProteinID:
CBG69727
UniProt:
C9Z3R1
LinkDB
All DBs
Position
complement(2984664..2986214)
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AA seq
516 aa
AA seq
DB search
MFDTLSDRLSATFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVRAFIKNVKERAL
GSDVSKALNPAQQVLKIVNEELVGILGGETRRLRFAKNPPTVIMLAGLQGAGKTTLAGKL
GHWLKEQGHSPLLVACDLQRPNAVNQLSVVAERAGVAVYAPEPGNGVGDPVKVAKDSIEF
AKSKVHDIVVVDTAGRLGIDQEMMQQAADIRDAVSPDEILFVVDAMIGQDAVNTAEAFRD
GVGFDGVVLSKLDGDARGGAALSIASVTGKPIMFASNGEKLDEFDAFHPDRMASRILDMG
DLLTLIEQAEKTFSQEEAAKMASKLASKKGQDFTLDDFLAQMEQVRKMGSISKLLGMLPG
MGQIKDQINNIDERDVDRTAAIIKSMTPAERQEPTIINGSRRARIAKGSGVEVSAVKNLV
ERFFEARKMMSRMAQGGGMPGMPGMPGMGGGPGRTKKQPRQAKGKQRSGNPMKRKQQEQE
EAARRAAAAQGGALGLPGQQAPQDFELPDEFKKFMG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgataccctctccgaccgcctcagcgcgactttcaaaaacctccgcggcaagggc
aggttgtccgaggcggacatcgacgccacggcccgcgaaatccgtatcgcgctcctcgaa
gcggacgtcgccctgcccgtcgtccgggcgttcatcaagaacgtcaaggagagggcactc
ggttccgacgtctccaaggcgctcaacccggcccagcaggtcctcaagatcgtcaacgag
gaactggtcgggatcctcggcggcgagacccgccgtctgcggttcgccaagaacccgccg
accgtgatcatgctcgcgggtctgcagggtgccggtaagacgaccctcgcgggcaagctg
ggccactggctgaaggagcagggccactcgccgctgctcgtcgcctgcgacctccagcgc
ccgaacgcggtgaaccagctcagtgtcgtcgccgagcgcgccggtgtggcggtctacgcc
cccgagccgggcaacggcgtgggcgacccggtcaaggtcgccaaggactccatcgagttc
gcgaagtcgaaggtccacgacatcgtggtcgtcgacaccgcgggccgcctgggcatcgac
caggagatgatgcagcaggccgccgacatccgcgacgcggtctccccggacgagatcctc
ttcgtcgtcgacgcgatgatcggtcaggacgccgtcaacacggcggaggcgttccgggac
ggcgtcggcttcgacggcgtggtcctctccaagctcgacggtgacgcccgcggtggtgcc
gccctgtcgatcgcctcggtcaccggcaagccgatcatgttcgcgtcgaacggcgagaag
ctcgacgagttcgacgcgttccaccccgaccggatggcctcccgcatcctcgacatgggt
gacctgctcaccctgatcgagcaggcggagaagaccttcagccaggaagaggccgccaag
atggcctccaagctggcgtccaagaaggggcaggacttcacgctcgacgacttcctggcc
cagatggagcaggtcaggaagatgggcagcatcagcaagctgctcggcatgctgcccggc
atgggccagatcaaggaccagatcaacaacatcgacgagcgggacgtcgaccgcacggcg
gcgatcatcaagtcgatgaccccggccgagcgccaggagccgacgatcatcaacggctcg
cgtcgcgcccgtatcgccaagggttccggcgtcgaggtcagcgcggtgaagaacctcgtg
gagcggttcttcgaggcccgcaagatgatgtcccgcatggcccagggcggcggcatgccc
gggatgccgggcatgccgggcatgggtggcggccccggccggaccaagaagcagcccagg
caggccaagggcaagcagcgctccggcaacccgatgaagcgcaagcagcaggagcaggag
gaggccgcccgccgggccgccgccgcgcagggcggtgccctcgggctgccgggccagcag
gctcctcaggacttcgagctgccggacgagttcaagaagttcatgggctga
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