Streptomyces scabiei: SCAB_26381
Help
Entry
SCAB_26381 CDS
T01187
Symbol
fpg
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scb
Streptomyces scabiei
Pathway
scb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCAB_26381 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_26381 (fpg)
Enzymes [BR:
scb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SCAB_26381 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCAB_26381 (fpg)
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCAB_26381 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CBG69742
UniProt:
C9Z3S6
LinkDB
All DBs
Position
complement(3004435..3005295)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLARWVAHRTVADVEVLHPRAIRRHLAGPEDFAHRLKGHRIGEPGRRG
KYLWLPVEDTGIAVLAHLGMSGQLLVQPHEAADEKHLRIRVRFADDLLTELRFVDQRTFG
GLSLHDTTPDGLPDVIAHIARDPLDPLFDAEAFHQALRRKRTTIKRALLDQSLISGVGNI
YADEALWRSRLHYERPTAGFTRPRTTELLGHVRDVMNAALAVGGTSFDSLYVNVNGQSGY
FDRSLDAYGREGLPCRRCATPMRRRPWMNRSSYFCPTCQRAPRVSS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaactccccgaggtcgaggtggtccgccgcggcctggcgcgctgggtggcgcac
cgcaccgtcgcggacgtcgaggtgctccacccccgggcgatccgccggcacctggccggc
cccgaggacttcgcgcaccggctgaagggccaccgcatcggtgagcccggccgacgcggc
aaatacctgtggctgcccgtcgaggacaccggcatcgccgtcctcgcgcacctcggcatg
agtggccaactgctcgtgcagccccacgaggcggctgacgagaagcacctcaggatccgc
gtccgcttcgccgacgacctgctcaccgaactccgcttcgtcgaccaacgcaccttcggc
ggactgtcgttgcacgacaccacccccgacggcctgccggacgtcatcgcgcacatcgcc
cgcgacccgctcgacccgctgttcgacgcggaggcgttccaccaggcgctgcgcaggaag
aggacgaccatcaaacgggccctgctcgaccagtcgttgatcagcggggttggcaacatc
tacgccgacgaggcgttgtggcggtcccggctgcactacgagcgccccaccgcgggcttc
acccgtccccgcaccaccgaactcctgggccacgtacgggacgtcatgaacgcggcgctg
gcggtgggcggcaccagtttcgacagcctctacgtcaacgtgaacggtcagtccggatac
ttcgaccggtcactggacgcgtacggccgggagggactgccctgccggcgctgtgccacg
ccgatgcggcgacggccgtggatgaaccggtccagctacttctgcccgacgtgtcagcgg
gccccgcgcgtctcgtcgtaa
DBGET
integrated database retrieval system
