Streptomyces scabiei: SCAB_27301
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Entry
SCAB_27301 CDS
T01187
Symbol
trmU
Name
(GenBank) putative tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
scb
Streptomyces scabiei
Pathway
scb04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SCAB_27301 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scb03016
]
SCAB_27301 (trmU)
Enzymes [BR:
scb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SCAB_27301 (trmU)
Transfer RNA biogenesis [BR:
scb03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SCAB_27301 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
ThiI
Asn_synthase
QueC
Motif
Other DBs
NCBI-ProteinID:
CBG69832
UniProt:
C9Z5C3
LinkDB
All DBs
Position
complement(3112243..3113373)
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AA seq
376 aa
AA seq
DB search
MTEIPQRPRPLRVLAAMSGGVDSAVAAARAAEAGHDVTGVHLALSANPQSFRTGARGCCT
IEDSRDARRAADVIGIPFYVWDLAERFREDVVEDFVAEYEAGRTPNPCLRCNEKIKFAAL
LDKALALGFDAVCTGHYAQVIVREDGTRELHRASDMAKDQSYVLGVLDDRQLAHAMFPLG
DTVTTKDEIRAEAERRGLAVAKKPDSHDICFIADGDTQGFLANRLGRSEGDIVDESGTVL
GTHEGAFGYTIGQRKGLRIGTPASDGKPRYVLDISPVNNTVTVGPASSLDVEALTAIRPR
WCGAAPTGPGTYTAQLRAHGGETEVRAEPVDGTLEVSFTEPVRGVAPGQAIVLYDGTRVV
GSATIASTTRAGAAVS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgactgagatcccgcagcgcccccgccccctccgtgtcctcgccgccatgtccggcggg
gtcgactccgccgtggccgccgcccgcgcggcggaagccgggcacgacgtgacgggcgtc
cacctggcgctgtccgccaacccgcagtcgttccggaccggcgcgcgcggctgctgcacg
atcgaggactcccgggacgcccgccgcgccgccgacgtcatcggcatccccttctatgtg
tgggacctcgccgagcgcttccgcgaggacgtcgtcgaggacttcgtcgccgagtacgag
gctggacgcaccccgaacccctgcctgcgctgcaacgagaagatcaagttcgcggccctg
ctcgacaaggccctcgccctgggcttcgacgccgtctgcaccggccactacgcccaggtg
atcgtgcgcgaggacggcacccgggagctgcaccgcgcctccgacatggccaaggaccag
tcgtacgtcctgggcgtgctcgacgaccggcagctcgcccacgcgatgttccccctcggc
gacaccgtgacgacgaaggacgagatccgcgccgaggccgagcgcagggggctcgccgtc
gccaagaagcccgactcccacgacatctgcttcatcgccgacggcgacacccagggcttc
ctcgcgaaccgcctgggccgctccgagggcgacatcgtcgacgagtccggcaccgtcctc
ggcacccacgagggcgcgttcggctacaccatcggccagcgcaagggcctgcgcatcggc
acgcccgcctccgacggcaagccgcgctacgtcctcgacatctccccggtgaacaacacg
gtgaccgtcggcccggcgtcctccctcgacgtcgaggccctgaccgcgatccgcccccgc
tggtgcggcgcggcccccaccggccccggcacctacaccgcccagctgcgcgcgcacggc
ggcgagaccgaggtccgcgcggaaccggtcgacggcaccctggaggtgtccttcacggag
ccggtgcgcggggtggcccccggccaggcgatcgtgctgtacgacggcacgcgcgtggtg
gggtcggcgacgatcgcctccaccacgcgcgccggggcggccgtctcctag
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