Streptomyces scabiei: SCAB_30721
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Entry
SCAB_30721 CDS
T01187
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scb
Streptomyces scabiei
Pathway
scb03420
Nucleotide excision repair
scb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCAB_30721
03430 Mismatch repair
SCAB_30721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_30721
Enzymes [BR:
scb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCAB_30721
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCAB_30721
MMR (mismatch excision repair)
Other MMR factors
SCAB_30721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
AAA_12
Viral_helicase1
AAA_11
Zn_ribbon_TiaS
Zn_Ribbon_TF
Zn_ribbon_SprT
DUF6011
Motif
Other DBs
NCBI-ProteinID:
CBG70175
UniProt:
C9ZBR7
LinkDB
All DBs
Position
complement(3481364..3483586)
Genome browser
AA seq
740 aa
AA seq
DB search
MTAATHSTLFPRVPDSADAVLEGLDPEQRAVATALHGPVCVLAGAGTGKTRAITHRIAYG
VRAGMLQPASVLAVTFTNRAAGEMRGRLRQLGAAGVQARTFHSAALRQLQYFWPKAVGGA
MPRIVDRKIQLVADAAAACRIRLDRNELRDAAAEIEWSKVTRTVPSDYAAATAKHGREAP
RDPAEIAQIYAVYEELKRERVVIDFEDVLLLTVGILQDRQDIAEQVRSQYQHFVVDEYQD
VSPLQQRLLELWLGDRDDLCVVGDASQTIYSFTGATPDHLLDFRHRHPGATVVKLVRDYR
STPQVVHLANGLLSQARGRAADHRLELISQRAPGPEPRYTEYTDEPAEAEGAARRIRDLV
AAGVPAGEIAILFRTNSQSETYEQALADAGVPYQLRGAERFFDRPEVRKAGAALRAAARF
GGNDTLLEDAVDLPSQVRAVLSGEGWTGEPPAGSGAVRERWESLAALVNLAHDFAAARPD
ATLGDLVAELDERANAQHAPTVQGVTLASLHSAKGLEWDVVFLVGVAEGMMPITYARTDE
QIEEERRLLYVGVTRAREQLSVSWALSRAPGGRPGRRPSRFLDGLRPGSTARAGRTGAGG
TGGVERGSAGGRTGQGTAGGTEAVARRTSRTPARCRVCGRTLRDAGDMKLMRCEDCPSDM
DEGLYERLREWRAVQAQRSGQPDFCVFTDRTLMAIAEAGPSTPVELGRIPGVRTRKLQRY
GADVLDICAGREPGCEDRND
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactccaccctcttcccgcgggtccccgactcggccgacgcggtg
ctcgaagggctcgaccccgagcaacgcgcggtggcgacggccctgcacggcccggtgtgc
gtgctggcgggcgctggtacgggcaagacccgggcgatcacccaccggatcgcctacggc
gtgcgagccgggatgctccagcccgccagtgtgctggccgtcaccttcaccaaccgcgcc
gccggcgagatgcgcggccgcctccgccagctcggtgccgccggagtccaggcccggacg
ttccactcggccgcgctgcgccagctccagtacttctggccgaaggccgtcggcggtgcc
atgccgcgcattgtcgaccgcaagatccagctcgtcgcggacgcggccgccgcctgccgc
atccgtctcgatcgcaatgaactccgcgacgccgcagcggagatcgagtggtccaaggtc
acccggaccgtgccctccgactacgccgccgcgaccgccaagcacggccgcgaggccccc
cgggacccggcggagatcgcccagatctacgcggtgtacgaggagctgaagcgcgagcgg
gtcgtcatcgacttcgaggacgtcctcctgctcacggtcggtatcctccaggaccgccag
gacatcgccgagcaggtccgctcccagtaccagcacttcgtggtcgacgagtatcaggac
gtcagccccctccagcagcgtctcctggagctgtggctcggcgaccgggacgacctgtgc
gtcgtgggcgacgccagccagacgatctactcgttcacaggagcaactcccgaccatctg
ctcgacttccgccaccgtcaccccggggccaccgtcgtcaagctggttcgcgactaccgc
tccacgccgcaggtcgtccacctcgccaacggtctgctgtcccaggcccgcggccgcgcc
gccgaccatcgcctcgaactgatctcgcagcgcgcaccgggcccggagccccgctacacc
gaatacacggacgagcccgccgaggccgagggcgccgcccgccgcatccgggatctcgtc
gccgccggtgtgcccgccggcgagatcgccatcctgttccggaccaactcccagtccgag
acctatgagcaggccctcgcggacgccggggtgccctaccagctgcgcggagcggaacgc
ttcttcgaccgccccgaggtacgcaaggcgggtgccgcgctgagagccgccgcccgcttc
ggcggcaacgacaccctgctcgaggacgccgtcgaccttccctcgcaggtgcgggccgtg
ctgtccggcgaggggtggaccggtgaaccccccgcggggtccggcgcggtcagggaacgc
tgggagtcgctggcggccctggtgaacctggcccacgacttcgccgcggccagacccgac
gcgacactcggcgacctcgtcgcggaacttgacgaacgcgcgaacgcccagcacgccccg
accgtccagggcgtcaccctcgcctccctgcactccgcgaaagggctggagtgggacgtc
gtctttctggtgggtgtcgccgagggcatgatgccgatcacctacgcgagaacggacgaa
cagatcgaggaggagaggcgactcctctacgtgggggtcacccgggcgcgcgagcaactg
tcggtctcctgggccctgtcccgggcgcccggtggccgtcccggccgccgtcccagccgc
ttcctcgacggactgcgccccggctccaccgcccgggcgggccggaccggtgccgggggc
accggtggcgtcgaacggggctcggcgggcggccgtacgggtcagggcacggccggcggc
accgaggcggtcgcccgccgcaccagccggacgcccgcccgctgccgtgtctgcgggcgc
accctgcgggacgccggggacatgaagctgatgcgctgcgaggactgcccctccgacatg
gacgagggcctctacgagcgactgcgcgagtggcgcgcggtccaggcgcagcgcagcggc
caaccggacttctgtgtcttcaccgacagaaccctgatggcgatcgcggaagcggggccg
agcactccggttgagctcggccgcatccccggtgtgcgcacccgaaagctgcagcgctac
ggggccgatgttctcgacatctgcgcaggtcgggagcctgggtgcgaggaccggaacgac
tga
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